Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00426 ATGGCACCATATGGGACTCCAGTCCCGTATCCTGCTATGTACCCTCCTGGAAATATCTATGCTCATCCTAGCATGGTAGTGACTCCAAGTGCTATGCACCAAACTACAGAGTTTGAAGGGAAGGGACCTGATGGAAAGGATAAAGATTCATCTAAAAAACCAAAGGGCAGTTCTGCGAATACATGTGCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGAGGGATTTTCACAAAGTGGAGAAAGTGGTTCAGAGGGTTCATCAAATGGTAGTGATGAGAACCAACAGGAATCAGCTAGAAACAAGAAGGGAGGCTTTGACCTCATGCTTGTTAATGGAGCGAACGTACAGAATAATACCACTGGACCCATTTCTCAATCGCCTGTTCCCGGAAATCCTGTTGTCTCGATGCCTGCTACTAATCTTAATATCGGAATGGATTTATGGAATGCATCTCCTGCTAATGCTGAAGCCGCCAAAATGAGACACAATCAATCTAGTGCCCCTGGAGCTGGTGAACAATGGATGCAACAAGATGATCGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAATCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGCTACAAAAGAGGGTTGAGGCGTTGGGAGGTGAGAATCGAACTCTGAGAGAAGAGCTTCAGAAACTTTCTGAGGAATGCGAGAAGCTTACATCTGAAAACAATTCTATCAAGGAAGAGTTGGAACAATTGTGTGGGCCGGAGGTAGTTGCTAACCTtgaatga 801 0.4544 MAPYGTPVPYPAMYPPGNIYAHPSMVVTPSAMHQTTEFEGKGPDGKDKDSSKKPKGSSANTCAKAGESGKAGSGSGNEGFSQSGESGSEGSSNGSDENQQESARNKKGGFDLMLVNGANVQNNTTGPISQSPVPGNPVVSMPATNLNIGMDLWNASPANAEAAKMRHNQSSAPGAGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENNSIKEELEQLCGPEVVANLE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00426 266 Pfam bZIP transcription factor 185 246 IPR004827 GO:0003700|GO:0006355
Tsu02g00426 266 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Tsu02g00426 266 CDD bZIP_plant_GBF1 189 239 IPR045314 GO:0003700|GO:0006355
Tsu02g00426 266 MobiDBLite consensus disorder prediction 1 16 - -
Tsu02g00426 266 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 266 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tsu02g00426 266 MobiDBLite consensus disorder prediction 74 99 - -
Tsu02g00426 266 Pfam G-box binding protein MFMR 1 25 IPR012900 -
Tsu02g00426 266 MobiDBLite consensus disorder prediction 1 109 - -
Tsu02g00426 266 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Tsu02g00426 266 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Tsu02g00426 266 MobiDBLite consensus disorder prediction 163 177 - -
Tsu02g00426 266 Coils Coil 197 252 - -
Tsu02g00426 266 SUPERFAMILY Leucine zipper domain 187 243 IPR046347 GO:0003700|GO:0006355
Tsu02g00426 266 MobiDBLite consensus disorder prediction 39 54 - -
Tsu02g00426 266 Gene3D - 187 243 - -
Tsu02g00426 266 MobiDBLite consensus disorder prediction 161 209 - -
Tsu02g00426 266 Pfam Disordered region downstream of MFMR 48 158 - -
Tsu02g00426 266 PANTHER G-BOX-BINDING FACTOR 1 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00426 Tsu-Chr2 3571575 3576671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00426 1 266 bZIP Transcription Factor Family AT4G36730 51.311 8.10e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g00426 MFMR_assoc 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00426 K09060 - gmx:778191 385.185