Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00406 ATGAGCTCAAGCGATGCGAGTATACAACGAGGTTCATCAACGatgGTGGAGTGCAAACCTCAATGTAAAGCacttttatttttgacataCCAGAGTTTGGGCTATCTATTTGGTGACATAAGCCTCTCCCCACTTTATGTCTATCAAAGTATATTTTCTGGAAGACTGAATCATGTTCAAAATGAGGATGCAATATTTGGTgcattttctttgattttttggaCTCTCTCTATTATTTCTTTGTTGAAGTATGTTGTTTTCATGTTGAGTGCAGATGATAATGGCGAAGGGGGAACTGTTGCTTTGTATTCACACCTTTGCAGAAATGCAAAATTTTCTTTGCTGCCTAATCATCAAGCATCTGATGAGGAGCTCTCTACATATCACAAACCTGGTTACTCAAATAGAAATATACCACCCTCATCTTTGAaaagattcattgaaaaacataAGAGCACAAAATTTGTTTTGCTTAGTTTTGTTTTACTTGGTGCTTGCATGGTAATTTGTTATGGTGCACTCATGCCTGCCATTTCAGTTCTTTCTTCTGTTGAAGGGTTGAAAATTGAAGCGAAGATTAAAAACAATAGTATGGTGCCTCTTATTTCTTGTGTTCTACTGGTTGGACTATTTGTTCTGCAACACCGTGGCTCCCACACGGTTGCCTTCATGTTTCCTCCCATAATCATCCTATGGTTACTGTCTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGAATATATCAGGCTCTTTCtccatattatatatacaaattcTTTTCGGTTACAGGAAAAGATGGTTGGACTAATCTTGGAGGCGTATTTTTGTGTGTTACAGGGACTGAAGCTATGTTTACAGACCTTGGGTACTACAAACAAGCCCCTGTAAGGGTTGCATTTTCTTGTGTCATTTACCCATGTCTAATTCTTCAGTACATGGGGCAGGCTGCTTTTCTGTCAAAGAATTTATCCGCAGTACCTATAAGCTTTTATGCTTCTATTCCAGATGTCCTCTTTTGGCCGGTATTTGTGGTGGCTGCTTTGGCAGCAATAGTTGCAAGTCAGGCTGTCATCTCTTCGACATTCTCAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGTATTAAGGCAGTACATTCCAGACGGTGGATTAATGGTCAGACATATATACCAGAGATAAACTGGATTCTTATGGTAATCAGCTTGGTTGTGACAGTTGGGTTTGAAAACACGAGCCATATAGGATATGCTTATGGGATTGCATGTCTGATTGTGGGATTTGTGACTACATGGTTGACTTCACTTGTCATCAACCTTGTATGGCATCGAAGTCTTATAGTTGCTGTAGCATTTCTCTTATTCTTTGGTTCGATAGAGGTCCTCTTTCTTTCATCTTATTGCATGAAAATCCCAAATGGTGGCTGGCTTCCAATTGTGCTCTCTATGGTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGAAAAAAGTATTTCTTTGATATGCATAGCAAAGTTTCAATGAGGGGGATCCTTACTTTGGGTCCTGGTCTTGGGATTGTTAGGGTCCCAGGGATGGGCCTTATCTATACCGAATTGGCTACTGGAGTCCCTGCCAGTTTCACTCATTTCTTGACAAATCTACCGGCTTTCTACCaagtggttgtttttgtttgtattaAGACTGTGCCTGTGCCTTCTGTGCCCCAAGCAGAACGTTATCTCATTGGCCGAATTGGTCCAAAATCCTATCGGTTGTATCGGTGCATTGTTCGACATGGTTACAAAGATGTTTATAGCcatgaaattaattttgaaaatgaactgGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCTGAAGGTTGTTCTGGAAACCTAGATGGCAGTGCAGATGGCCGTATGGCGGTCGTTAGGACGTCTGGGAAGTTTGGAACAAGATTGCGAATGTCAGAATCTGCTGGTGTTGAAGAAAGCGACAGTAATAATCTCCCCGGAGCTTTGACTGTTAGTAGCAGTAAATCTCCGACATTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCACCGGAACTCAACAACACTAGACGGCGGATTAAATTTGAGGTTCTAAATACAATATATAGAGATCCGCGTGTCAAGGAAGAGCTCATGGAACTTGTGGAAGCCAAGCGTGCTGGAGTAGCATATGTAATAGGCCATTCTCATGTAAAGGCCAAGTGGAACTCTTCCTTTGTGAAGAAGTTTGCTGTAAACCTCTACTCTTTTCTTCGAAAAAATTGCCGCTCCCCTGCTGTTGGACTAAATATTCCCCAGACTTCTCTGATTAAGGTTGGAATGAATTACCATGTCTAG 2379 0.3943 MSSSDASIQRGSSTMVECKPQCKALLFLTYQSLGYLFGDISLSPLYVYQSIFSGRLNHVQNEDAIFGAFSLIFWTLSIISLLKYVVFMLSADDNGEGGTVALYSHLCRNAKFSLLPNHQASDEELSTYHKPGYSNRNIPPSSLKRFIEKHKSTKFVLLSFVLLGACMVICYGALMPAISVLSSVEGLKIEAKIKNNSMVPLISCVLLVGLFVLQHRGSHTVAFMFPPIIILWLLSIFMIGIYNVIKWNPRIYQALSPYYIYKFFSVTGKDGWTNLGGVFLCVTGTEAMFTDLGYYKQAPVRVAFSCVIYPCLILQYMGQAAFLSKNLSAVPISFYASIPDVLFWPVFVVAALAAIVASQAVISSTFSIVQQCHAFECFPRIKAVHSRRWINGQTYIPEINWILMVISLVVTVGFENTSHIGYAYGIACLIVGFVTTWLTSLVINLVWHRSLIVAVAFLLFFGSIEVLFLSSYCMKIPNGGWLPIVLSMVFMVVMYVWHYGSRKKYFFDMHSKVSMRGILTLGPGLGIVRVPGMGLIYTELATGVPASFTHFLTNLPAFYQVVVFVCIKTVPVPSVPQAERYLIGRIGPKSYRLYRCIVRHGYKDVYSHEINFENELVMSIAEFIQLEAEGCSGNLDGSADGRMAVVRTSGKFGTRLRMSESAGVEESDSNNLPGALTVSSSKSPTLKKLQAMYEQESPELNNTRRRIKFEVLNTIYRDPRVKEELMELVEAKRAGVAYVIGHSHVKAKWNSSFVKKFAVNLYSFLRKNCRSPAVGLNIPQTSLIKVGMNYHV 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00406 792 Pfam K+ potassium transporter 30 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu02g00406 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu02g00406 792 TIGRFAM kup: potassium uptake protein 28 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu02g00406 792 PANTHER POTASSIUM TRANSPORTER 3 15 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00406 Tsu-Chr2 3397155 3405007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00406 15 792 Inorganic Solute Cotransporters AT4G23640 61.667 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00406 K03549 - gmx:100819743 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00406 02 3397155 3405007 Tsu02g00406 02 3397155 3405007 ECH