Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g00405 | ATGGGTAGCAACTGCAGCACCGGCACCGGTACCGGTATCACCACCACCTACTCCGATCATCCACCTCAAAACCTCCCCAAAATCCTCCCACAAAACTCCACTCCTTCACCCCCTCAACCTCCCTTATCCACCACCCTCGGCCGCATCCTCGGCCGTCCCATGCAAGACGTCCGCTCCATCTTCATCTTCGGCCGTGAACTCGGCCGTGGACAATTCGGCGTTACTTATTTAGTAACCCACAAAGTCACGAAAGAACAATTCGCTTGCAAATCAATCGCTACACGAAAACTCATAAACCgtgatgatattgatgatgtTCGCCGTGAAGTTCAAATCATGCACCATCTCACCGGCCACCGTAACATTGTTGAACTCAAAGGTGCTTATGAGGATAAACACTCTGTTAACCTTGTAATGGAGCTTTGTGCCGGCGGTGAGCTTTTTGATCGGATTATTACTAAAGGACATTACTCTGAACGTGCTGCTGCTAATCTTTGCCGTCAGATTGTTACTGTGGTTCATAACTGTCATACTATGGGAGTTATGCACAGAGACTTGAAGCCTGAGAATTTCTTGTTCCTTGGTAAAGATGAGAATTCGCCTCTTAAGGCTACGGATTTTGGTCTCTCTGTGTTTTTCAAATCAGGAGATGTGTTTAAAGATCTTGTTGGGAGTGCCTATTACGTTGCTCCTGAAGTGCTGCGTAGAAGTTATGGGCCTGAAACTGATATTTGGAGTGCCGGGATTATATTATACATTCTGCTTTCTGGTGTACCCCCCTTCTGGGCAGaaaatgaaaagggtATCTTTGATGCTATTCTTCGTGGACATATTGATTTTGCGTCTGCTCCCTGGCCTTCTATATCAAGTAGTGCCAAAGACCTGGTCAAGAAGATGCTACGAGAAGACCCCAAAGAACGGCTTTCAGCAGTTGAAGTACTTAATCATCCTTGGATGAGAGTAGATGGAGATGCATCTGACAAGCCTCTTGATATTGCTGTTTTAAGCAGAATGAAACAATTCCGAGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGgtTATCGCCGAAAacctttctgaagaagaaattATTGGCTTGAAAGAAATGTTCAAATCCATGGATACAGACGACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCTAAACTCGGCAGTAAAATGTCCGAATCGGAAGTAAGGCAGTTGATGGAAGCGGCCGATGTGGACGGCAATGGAACCATTGATTATATTGAATTTATAACCGCCACTATGCATATGAATAGAATGGAAAGAGAGGATCACCTATATAAAGCCTTTGAATATTTTGACCAAGATAAGAGCGGGTACATCACAAAGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAATACAATAAAGGAGATCATTGCCGAAGTTGATACAGACAATGATGATAGAATTAACTATGATGAGTTTGTAGCTATGATGAGAAAAGGAAACCCAGATATAATAACCCACAGACGTCGCAAATAA | 1539 | 0.423 | MGSNCSTGTGTGITTTYSDHPPQNLPKILPQNSTPSPPQPPLSTTLGRILGRPMQDVRSIFIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLINRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDKHSVNLVMELCAGGELFDRIITKGHYSERAAANLCRQIVTVVHNCHTMGVMHRDLKPENFLFLGKDENSPLKATDFGLSVFFKSGDVFKDLVGSAYYVAPEVLRRSYGPETDIWSAGIILYILLSGVPPFWAENEKGIFDAILRGHIDFASAPWPSISSSAKDLVKKMLREDPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDDSGTITFEELKAGLPKLGSKMSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDQDKSGYITKEELESALKKYNMGDENTIKEIIAEVDTDNDDRINYDEFVAMMRKGNPDIITHRRRK | 512 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g00405 | 512 | SUPERFAMILY | EF-hand | 358 | 499 | IPR011992 | - | |
Tsu02g00405 | 512 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Tsu02g00405 | 512 | SMART | serkin_6 | 61 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00405 | 512 | ProSiteProfiles | Protein kinase domain profile. | 61 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00405 | 512 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 23 | 504 | - | - | |
Tsu02g00405 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 447 | 459 | IPR018247 | - | |
Tsu02g00405 | 512 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Tsu02g00405 | 512 | Pfam | EF-hand domain pair | 367 | 427 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | Pfam | EF-hand domain pair | 437 | 499 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 470 | 504 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | Pfam | Protein kinase domain | 64 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00405 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 181 | 193 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu02g00405 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 320 | IPR011009 | - | |
Tsu02g00405 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 67 | 90 | IPR017441 | GO:0005524 | |
Tsu02g00405 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 411 | 423 | IPR018247 | - | |
Tsu02g00405 | 512 | Gene3D | - | 327 | 502 | - | - | |
Tsu02g00405 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 375 | 387 | IPR018247 | - | |
Tsu02g00405 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 362 | 397 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 15 | 23 | 504 | - | - | |
Tsu02g00405 | 512 | SMART | efh_1 | 473 | 501 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | SMART | efh_1 | 402 | 430 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | SMART | efh_1 | 366 | 394 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | SMART | efh_1 | 438 | 466 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 434 | 469 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 482 | 494 | IPR018247 | - | |
Tsu02g00405 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 63 | 146 | - | - | |
Tsu02g00405 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 398 | 433 | IPR002048 | GO:0005509 | |
Tsu02g00405 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 326 | - | - | |
Tsu02g00405 | 512 | CDD | STKc_CAMK | 61 | 318 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g00405 | Tsu-Chr2 | 3389380 | 3393934 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g00405 | 47 | 511 | EF-hand Containing Proteins | AT4G23650 | 79.570 | 0.0 | 801 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Tsu02g00405 | Pkinase | 1.2e-73 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g00405 | K13412 | - | gmx:100777096 | 889.797 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g00405 | 02 | 3389380 | 3393934 | Tsu02g00405 | 02 | 3389380 | 3393934 | ECH | |
Tsu05g00246 | 05 | 1803861 | 1808612 | Tsu02g00405 | 02 | 3389380 | 3393934 | PCT |