Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00394 atgaaacttgtTCATACTTTATGCTTTATTATATGCAtattgtgtgtgagtttatggCATGGAAATTGTGAACCTGTTGAAGATAAAGTGGTTTTGCTTGAGTTTATGAACAAGTTTTCACCTTCAAGAACTTTGAATTGGAATGAGAGTTTATCTGTTTGTGATAATTGGACTGGTGTAACTTGCAATGAAGATAGGTCTAGAGTAATAGCTATTCGTTTACCTGGTGTTGGATTTCATGGAAATATTCCACCTAATACTATTAGTAATCTTTCAGCTCTTCAAATTCTTAGTCTTAGATCCAATTTCATAACTGGGTTTTTTCCTTCTGATTTTTCCAATCTAAAAAACTTGTCTTTTCTTTATCTTCAGTTCAATAATTTATCTGGGTCTTTACCTGATTTCTCAGCTTGGGAAAATCTTACTGTTGTTAATTTGTCAAATAACAAATTCAATGGTACTATTCCTTTTTCACTTTCTAATTTGACTCAGCTTTCTGGTTTGAACCTTGCAAACAATTCTCTTTCTGGTGAAATTCCTGATCTTGATATCTCTAGATTGCAGCAGCTGAATTTGTCTAACAATAACTTACATGGTACTGTGCCTATGTCTTTACAAAGGTTTCCTGATTCAGCTTTCATTGGAAATAACATTAGTCTTGGAAATTATACTTCTGTTTCGCCGGTGATTTCGCCGGTTTACGAGCCTTCTTCGAGTTCTGAGAAACGTGGGAGGCTAAGTGAAACAGCATTTCTAGGAATTGTTATTGTTGGTAGTTTTCTTGGCCTTGTAGCATTTGGTTTTTTGATGTTTGTGTGCTGTAGTTCTAGAAAAAAAGGTGAAGATGACGATGATGCATTTGTTGGAATGTCGAATAAGGGTAAAATGTCTCCTGAAAAAGCGGTCTCGAGGAACATGGATGCTAATAATAAACTGACTTTCTTTGAGGGATGTAATTATGCCTttgatttggaggatttgttGAGAGCTTCTGCTGAGGTTTTGGGAAAGGGAACATTTGGTACTGCTTATAAGGCGATTCTTGAGGACGCAACCGGTGTTGTTGTGAAGAGGTTGAAGGAGGTAGCCTTCGGAAAGAAGGATTTTGAGCAATTCATGGAGATTATTGGAAGTCTTAAACATGAGAATGTGGTTGAGCTGAAAGCATATTATTATTCCAAAGATGAGAAACTGATGGTATATGATTATTACAACCAGGGGAGTGTCTCTGCTTTGTTGCATGGGAAAAGAGGAGAGGAAAAGGTGCCTTTAGATTGGGATACTCGGTTGAGAATAGCTTTAGGTGCTGCAAGAGGCATCGCTCGCATCCATGTTGAAAATGGTGGTAAACTTGTACATGGAAACATCAAGTCCTCAAACATCTTTCTCAATACTAAACAGCATGGATGTGTATCTGATCTTGGTCTAGCAACCATATCAACCTCACTTCCCCTACCAGTCTCACGAGCTGCCGGTTACCGAGCACCTGAAGTTACAGACACAAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTCGGCGTGGTGTTACTAGAGCTTCTAACTGGGAAATCGCCTATCCACAATACTGGCGGTGATGAGATTATCCACTTGGTGAGGTGGGTTCATTCGGTCGTGCGAGAGGAGTGGACAGCCGAAGTGTTTGACTTAGAGTTGATGAGATATCCAAATATAGAAGAAGAGATGGTTGAGATGTTGCAGATAGCTATGTCATGTGTGGTAAGAATGGCTGATCAGAGACCTAAGATGTCAGAAGTTGTGAAGATGATAGAAAATGTGAGACAGACCGAGAATACACAAACTCGGCCATCATCTGAGAACCAAGGAGGAGTTAAATTATCATCTCAACATGATAACGACAATGATAACTCCCCTTCTTCCACTTCTTCCCCCTTACCAAAAGGAAGTGATTGA 1935 0.3829 MKLVHTLCFIICILCVSLWHGNCEPVEDKVVLLEFMNKFSPSRTLNWNESLSVCDNWTGVTCNEDRSRVIAIRLPGVGFHGNIPPNTISNLSALQILSLRSNFITGFFPSDFSNLKNLSFLYLQFNNLSGSLPDFSAWENLTVVNLSNNKFNGTIPFSLSNLTQLSGLNLANNSLSGEIPDLDISRLQQLNLSNNNLHGTVPMSLQRFPDSAFIGNNISLGNYTSVSPVISPVYEPSSSSEKRGRLSETAFLGIVIVGSFLGLVAFGFLMFVCCSSRKKGEDDDDAFVGMSNKGKMSPEKAVSRNMDANNKLTFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATGVVVKRLKEVAFGKKDFEQFMEIIGSLKHENVVELKAYYYSKDEKLMVYDYYNQGSVSALLHGKRGEEKVPLDWDTRLRIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQHGCVSDLGLATISTSLPLPVSRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHNTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMADQRPKMSEVVKMIENVRQTENTQTRPSSENQGGVKLSSQHDNDNDNSPSSTSSPLPKGSD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00394 644 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Tsu02g00394 644 Gene3D Phosphorylase Kinase; domain 1 295 403 - -
Tsu02g00394 644 MobiDBLite consensus disorder prediction 601 644 - -
Tsu02g00394 644 Gene3D Transferase(Phosphotransferase) domain 1 405 626 - -
Tsu02g00394 644 Pfam Protein kinase domain 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00394 644 SUPERFAMILY L domain-like 28 208 - -
Tsu02g00394 644 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00394 644 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Tsu02g00394 644 Gene3D Ribonuclease Inhibitor 138 227 IPR032675 -
Tsu02g00394 644 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Tsu02g00394 644 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Tsu02g00394 644 SUPERFAMILY Protein kinase-like (PK-like) 333 597 IPR011009 -
Tsu02g00394 644 PANTHER PROTEIN, PUTATIVE-RELATED 20 609 - -
Tsu02g00394 644 PANTHER OS05G0588300 PROTEIN 20 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00394 Tsu-Chr2 3250375 3254453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00394 18 614 Receptor kinase-like Gene Family AT4G23740 66.287 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu02g00394 Pkinase 4.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00394 - - gmx:100814524 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00394 02 3250375 3254453 Tsu02g00394 02 3250375 3254453 ECH
Tsu05g00237 05 1741568 1745020 Tsu02g00394 02 3250375 3254453 PCT