Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00381 ATGGAGAATGAATGTAACTGGGAGCATAACACACTCATTAATGAGCTAATTCAAGGAATGGATGTAGCAAAGAGATTGAAGGAAGAGTTGAGGACACCATATTCCCTTGACACAAGGGATTTGCAGGTGCAGATGATATTATCTTCTTACGAAAAGGCTCTACGAATTCTAAGATGTAATGAATCGACTTCTAAGTCGCAGACTATAACTCCATTAACAACTTCGTTACCGGAGTCCCCTGCGTCTACCAATGGTAGTCCGCTGAGCGAGGACTTTGACGGGGCCATACAAGACCACCGGGAGgttaaaaacaaatcaaagaaaAGAAAGGCTACACCCAAATTGATGGATCAGATAAAAGTTAGCTGTGAAAGTGGCCTTGAAGGACCACATGAAGATGGCTATAACTGGAGAAAATATGGTCAGAAAGATATCCTCAGTGCCAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGAACTGCTGGGCCACAAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTCGACATAACTTATAGAGGAAAGCATACCTGTTCTCAGGGAAACAATGCCATTGAACCATATAAGTCACAAGAAAAACAAGAGAAACCACAAAgtcataataataatgatattcaACATGCACACCCATCACAAGAAAGCTTTACAAACTTCAGCAACACCTTGACTGTCAAAACGGATAATCTGGGAAACGAACAAACTCCTTTCCCCTTCCCTTCCACTTCATTTGGATACACAACACAAGAAAACCAAAGCTGGTTTCCTTCAGGCTTAGAAAACGACTCATTCTTGAGCAGCCTTTTCCAAACACACTTATTATCTCCAGTAACACCAGAATCAAACTATTTCTCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGTTCTATAACAATCCTCGTTCAGAATCCGACATTACAGAGATCATTTCCACCAACACATCAGTCACAAATTCCCCGATTCCCAATTTTCATTTTCCACTCGATTCAGCGGACATCGATCCAAATTTCCCTTTCAATACTCCCGGCTTTTTCTCCTAA 1080 0.4028 MENECNWEHNTLINELIQGMDVAKRLKEELRTPYSLDTRDLQVQMILSSYEKALRILRCNESTSKSQTITPLTTSLPESPASTNGSPLSEDFDGAIQDHREVKNKSKKRKATPKLMDQIKVSCESGLEGPHEDGYNWRKYGQKDILSAKYPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAIEPYKSQEKQEKPQSHNNNDIQHAHPSQESFTNFSNTLTVKTDNLGNEQTPFPFPSTSFGYTTQENQSWFPSGLENDSFLSSLFQTHLLSPVTPESNYFSSPTFQMNEFDGFYNNPRSESDITEIISTNTSVTNSPIPNFHFPLDSADIDPNFPFNTPGFFS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00381 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Tsu02g00381 359 MobiDBLite consensus disorder prediction 67 87 - -
Tsu02g00381 359 Gene3D WRKY domain 117 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00381 359 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00381 359 MobiDBLite consensus disorder prediction 201 229 - -
Tsu02g00381 359 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00381 359 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g00381 359 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g00381 359 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00381 Tsu-Chr2 3182521 3185062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00381 6 351 WRKY Transcription Factor Family AT4G11070 38.764 2.50e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g00381 WRKY 5.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00381 - - gmx:100815760 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00381 02 3182521 3185062 Tsu02g00381 02 3182521 3185062 ECH
Tsu02g00381 02 3182521 3185062 Tsu08g00950 08 10435347 10438737 ECH