Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00351 ATGGCAGATGCTGAAACCAAAGCAAGAATCGAAGAAACAGTTCTTAAGATCCTCCATGAATCAAACATGGAAGAGGTAACAGAATCAAAGATCCGAAAACAAGCCTCCACCGAATTGGACCTTAACCTTAATCAGCCTCCATTCAAAGCTTTGGTGAGGCAAATCATTGAAAATTTTCTTGTAGAgaagcagcaacaacaacaaaaggaagaagaagaacaaaaacagcgtgagaaagaagaagaagaagaggaagaagaagaagaaaaaaagcaaGAGGTTAAACAAAAAGGTGTTTCCAGCAAAAGCAATGTCTATGTTGATTCTGGCGATCTCGTCATTTGCGAGCTTACGAAAAAGAGAAAGGTGACAATTCAGGATTTCAAAGGGAAAAGGTATGTCTCCATTAGGGAGTTTTACACCAAGGATGGCAAGGAACTTCCTTCTAACAAAGGAATAAGTTTGTCTGTGGAGCAGTGGGAAGCCTTTAAGAATTGTGTGCCTGCCATAGAAAAAGCCATTGAGAAACTGGAGTCACGTATATAA 546 0.3352 MADAETKARIEETVLKILHESNMEEVTESKIRKQASTELDLNLNQPPFKALVRQIIENFLVEKQQQQQKEEEEQKQREKEEEEEEEEEEKKQEVKQKGVSSKSNVYVDSGDLVICELTKKRKVTIQDFKGKRYVSIREFYTKDGKELPSNKGISLSVEQWEAFKNCVPAIEKAIEKLESRI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00351 181 SUPERFAMILY ssDNA-binding transcriptional regulator domain 114 177 IPR009044 GO:0003677|GO:0006355
Tsu02g00351 181 PIRSF RNA_polymII_KELP 2 181 IPR017415 -
Tsu02g00351 181 Pfam Transcriptional Coactivator p15 (PC4) 115 165 IPR003173 GO:0003677|GO:0006355
Tsu02g00351 181 SUPERFAMILY DEK C-terminal domain 5 59 - -
Tsu02g00351 181 Gene3D Transcriptional Coactivator Pc4; Chain A 105 181 IPR009044 GO:0003677|GO:0006355
Tsu02g00351 181 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 180 - -
Tsu02g00351 181 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 180 IPR045125 GO:0003713|GO:0060261
Tsu02g00351 181 Coils Coil 56 97 - -
Tsu02g00351 181 Pfam DEK C terminal domain 5 60 IPR014876 -
Tsu02g00351 181 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00351 Tsu-Chr2 2956490 2959450 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Tsu02g00351 DEK_C 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00351 K25815 - gmx:100305633 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00351 02 2956490 2959450 Tsu02g00351 02 2956490 2959450 ECH