Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00332 ATGGCGAATAATTTTGATTACATTTTACTAACACTATTAATCTTCACCGTTACAGTTACAGTAACAGtttcatcaaaatcaatggaAGAAGTAAAATCTTCAATCCCTCTCGTATCATTTCTCGAACGTCTTCAACAAACAGCATTCAACACATTCAAAAACAATTCCAATTTCGATCCTAAAACCTACGTCGATTTACCTCTCAAATTTCCCCTTTCCGTGACCGATCACGCTTTCCAGAATCTTCCTAAATCATCCACCGGTTCAGTTTCCGTTCACGATTTGAACCGGTTTATTGAAACTTATTTTGAAGGTGCAGGTGATGATTTATTGTACTTTGATCCAGAGGATTTTGTTCCTTTGCCTCAAGATTTTTTGCCTAAAGTGAAAAATCTTGAGGTTAGAGCTTGGGCGATTAAGGTTCATTCTCTTTGGAAAAATTTGAGTAGGAAAGTTTCTAGTGAAGTGAAGACTCATCCTGAGTTTCATACTTTGCTTCCTGTTGTTGATTCTGTTGTTATTCCTGGTTCGCGATTTCGCGAAGTTTATTATTGGGATTCTTATTGGGTAAttaggGGTTTGTTGGTAAGTAAAATGTATAAGACTGCTAAAGGTATTGTCAACAATCTCATTTCCTTCATTGAGGAATATGGGTTTGTTCTTAATGGTGCTAGAGCATACTACACTAATAGGAGCCAGCCTCCTCTTTTAAGCGCTATGATTTATGAGATATACCATAGAACTGGTGATGTGGAGTTAGTTAAAAGGTCTCTACCTGCACTACTGAAAGAGCATGAGTTTTGGAATTCAGATATACATAAAGTGACTGTTTCGGATGCTCAAGGTTGCACTCACACCTTAAATCGCTATTACGCAAGGTGGAACAAACCCAGACCAGAGTCGTCCATAATGGACAAGGCATCTGCTTCCAAGTTCACAACTGTTtctgaaaaacaacaattttacCGTGAACTAGCATCAGCAGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGACATCCTCCCAACTTCACAACATTGTCTACAACGTCAGTGATACCTGTTGATTTAAATGCATTTATACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAATGTTACTGGAGATCATAGCACTGCCAAACACTTCATGCAAATTTCTGATATTAGAAAGGAGGCAATTAACTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGATTCCTGGCTCAGCAATACCACACATGAGAAGGTTCATGATTGGGATACTCTGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATGCTTCCCTTGTGGGTAATGTTCTCAAAAGTCTCAAAACTTCTGGACTGCTTCGTGCTGCTGGAATTGCAACTTCTTTGAGTGATTCTGGACAGCAGTGGGATTTTCCAAATGGTTGGGCTCCACTTCAACACATGTTAGTTGAAGGTCTGGTAAAATCAGGGTTGAAAGAAGCAAGGTCATTGGCTGAAGAAATTGCCATCAGATGGATCACTACCAACTATATTGTTTACAAGAAAACAGATGTAATGCATGAAAAGTTTGACGTGGAGCATTGCGGAGAATTCGGAGGTGGGGGTGAATACGTACCTCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGTAAAATAGAATGTTGA 1746 0.3877 MANNFDYILLTLLIFTVTVTVTVSSKSMEEVKSSIPLVSFLERLQQTAFNTFKNNSNFDPKTYVDLPLKFPLSVTDHAFQNLPKSSTGSVSVHDLNRFIETYFEGAGDDLLYFDPEDFVPLPQDFLPKVKNLEVRAWAIKVHSLWKNLSRKVSSEVKTHPEFHTLLPVVDSVVIPGSRFREVYYWDSYWVIRGLLVSKMYKTAKGIVNNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYHRTGDVELVKRSLPALLKEHEFWNSDIHKVTVSDAQGCTHTLNRYYARWNKPRPESSIMDKASASKFTTVSEKQQFYRELASAAESGWDFSTRWMRHPPNFTTLSTTSVIPVDLNAFILGMELNIAFFANVTGDHSTAKHFMQISDIRKEAINSVFWNANMKQWLDSWLSNTTHEKVHDWDTLHQNQNVFASNFVPLWMKPFYSDASLVGNVLKSLKTSGLLRAAGIATSLSDSGQQWDFPNGWAPLQHMLVEGLVKSGLKEARSLAEEIAIRWITTNYIVYKKTDVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRKIEC 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 217 235 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 322 339 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 475 491 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 555 568 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 354 371 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 287 304 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PRINTS Glycosyl hydrolase family 37 signature 397 413 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 ProSitePatterns Trehalase signature 2. 482 491 IPR018232 GO:0004555|GO:0005991
Tsu02g00332 581 PANTHER TREHALASE 19 581 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 PANTHER TREHALASE 19 581 - -
Tsu02g00332 581 Pfam Trehalase 57 572 IPR001661 GO:0004555|GO:0005991
Tsu02g00332 581 SUPERFAMILY Six-hairpin glycosidases 54 574 IPR008928 GO:0005975
Tsu02g00332 581 Gene3D - 45 579 IPR012341 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00332 31 581 Trehalose Biosynthesis Gene Families AT4G24040 57.942 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00332 K01194 - gmx:547539 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00332 02 2814622 2819709 Tsu02g00332 02 2814622 2819709 ECH