Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00323 ATGGGGATTTGCTTCAGCAttgaacaaaataatcaaaatcatctTTCCCTCTCCGattcaaatccaaaaaaacCTAAATCATCAGGAAATGATTCCGGTTCTGCACGAACGACTACTACTACTACATTAGGTACTGGTTCCATGAATATCAAAGAGCTTCGCGAAGGTGCTGGATACAGCAACGTTACCATTTTTACATACGACGAATTGAGACTTGCTACTAAGCAATTTCGTCCTGATTTCATTCTAGGAGAAGGTGGATTTGGAGTTGTTTATAAAGGTCTCATTGATGATACTGTAAGAGCCGGTTATAAATCCACTGAAGTTGCAATTAAGGAACTTAATCGCGAAGGATTTCAAGGCGATAGAGAATGGCTTGCTGAAGTTAACTATCTGGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCTTTGGATATTGCTGCGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCTAGTGGGAGCTTGGAGAAACATCTTTTTCGCAGAACGGGCTCAACATTGACATGGTCAAAAAGAATGAAGATTGCTTTGCATGCTGCAAGAGGGCTTGCTTTTCTTCACGGGGCAGAAAGGCCCACCATATATCGTGACTTCAAGACATCAAATATCTTGCTAGATGCAGATTTCAATGCAAAGCTTTCAGACTTTGGCCTTGCAAAGGATGGGCCGATGGGGGACCAAACACATGTTTCAACACGAGTAATGGGCACATATGGATATGCTGCTCCGGAGTATGTCATGACTGGGCATTTGACTGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTTGAATTACTTATTGGTAGGAGAGCACTAGACAAAAGCAGGCCCAGTCGAGAGCACAACTTGGTTGAGTGGGCACGGCCGCtgttgaataataataaaaaacttctGAAAATTTTAGACCCGAAAGTAGAAGGGCAATATTCAAGTAAAACTGCAACAAAGGTAGCCCTTTTAGCATACCAATGTCTTAGCCAAAACCCGAAAGGCAGACCTCTCATGAGTCAGGTTGTTGAAATCCTTGAAAAGTTTCAGTCAAATGAGGAAGGTCAAAACCTTCAAAGTGGTGGTAGTAGTATAACCATTTACGAGGTTCCAAAGGGCAGCAATGATACTCCGGCTAAGGGCTAA 1170 0.4137 MGICFSIEQNNQNHLSLSDSNPKKPKSSGNDSGSARTTTTTTLGTGSMNIKELREGAGYSNVTIFTYDELRLATKQFRPDFILGEGGFGVVYKGLIDDTVRAGYKSTEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLFGYCCEDEHRLLVYEYMASGSLEKHLFRRTGSTLTWSKRMKIALHAARGLAFLHGAERPTIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNNNKKLLKILDPKVEGQYSSKTATKVALLAYQCLSQNPKGRPLMSQVVEILEKFQSNEEGQNLQSGGSSITIYEVPKGSNDTPAKG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00323 389 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Tsu02g00323 389 Gene3D Phosphorylase Kinase; domain 1 52 159 - -
Tsu02g00323 389 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 33 385 - -
Tsu02g00323 389 ProSiteProfiles Protein kinase domain profile. 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00323 389 Pfam Protein tyrosine and serine/threonine kinase 83 354 IPR001245 GO:0004672|GO:0006468
Tsu02g00323 389 CDD STKc_IRAK 83 357 - -
Tsu02g00323 389 MobiDBLite consensus disorder prediction 362 379 - -
Tsu02g00323 389 MobiDBLite consensus disorder prediction 362 389 - -
Tsu02g00323 389 MobiDBLite consensus disorder prediction 9 45 - -
Tsu02g00323 389 SUPERFAMILY Protein kinase-like (PK-like) 59 355 IPR011009 -
Tsu02g00323 389 PANTHER OS01G0588500 PROTEIN-RELATED 33 385 - -
Tsu02g00323 389 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00323 Tsu-Chr2 2713529 2717964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00323 4 354 Glycoside Hydrolase AT3G07070 45.763 1.09e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu02g00323 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00323 - - gmx:100800465 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00323 02 2713529 2717964 Tsu02g00323 02 2713529 2717964 ECH