Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00319 ATGGCACTAATAAATCATATTATGAACAAAAAAACCATATTCATTCTATTGTTATGTGTTGTTTCGTCTTATGCTGCTTCCGACGCTGAATTGCTCCTCAAGGTAAAGGAAAATCTAGAAAGACCAAACAATGTATTGACATCATGGAACACAACAACATCTCCTTGTGACGGCGATCATAGCAATTGGTACGGTGTTCGTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGAATATGAGGCTAAAAGGGTACATTGATATTGATTCTCTTAAGCAGTTACCATATCTTAGAACTATTAGTTTCATGAATAATGATTTTGAGGGTGCTTGGCCTGATATTAACAAAATTTTTGGTCTTAAATcgatttttctttcaaataacaaattttcTGGGGACATTCCTGGTGATGCTTTTGAAGGTATGATGTGGTTGAAGAAAATTCATTTGTCAAATAATCAGTTTACAGGTGTTATTCCACCTTCTGTGGTATTGTGTCCAAGGCTTATGGAGCTGAGATTGGATAGAAACAATTTCATTGGTCCTCTTCCTCATCTTAGACAAGCCAAATTGAAATCATTCACTGTAGCTAATAATCAGTTGCATGGACCAATACCAAACACACTTAGTAAAATCGCCGTTTCTTCCTTTTCCGGTAATGAAGGTTTATGTGGAACTCCATTGGCTGCATGTACTGCAAAGAAGCCGTCAATTGCAAGTATTTGTGTGGTTGGTGTGGTTGTTTGTGTAGCACTGATTGTGATTGGAGTCACACTGGGTTTCATCCTTCATCGGCGAAGAGACCGGGAGCAATCACTGGGTCAAGAGAATCAACCTTCAGACCACATCAACAACAAACTAGGACGGGGGGATGTTGGTAATGACAGTATAAGGTCGACAGGATCAGTGAGTTCCACTCACAGCAGAAGAGGTGATCACCTGAAGTTgtcttttataaaatatgacaGAGAAAGATTTGATTTGCAAGAGTTGTTGAGAGCTAATGCTGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAAGCTTCTTTGACAAGTGGAACAATAGTTGTGAAGAGGTTTAAGCAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAACATATGAGAAGGATAGGAAGATTGAATCATCAGAATTTGATTCCTCTTGTGGCTTACTAttatagaaaagaagaaaagctTTTGGTTACTGATTATGTTCAGAATGGCAGTCTGGCTGTTCGCCTTCATGGACACCAACAACTAGGTGAACCAAGCCTTGATTGGCCAATAAGATTGAAGATTGTGAAAGGAATAGCAAAAGGTCTTGAATATCTATACAAAGATATGCCAAGCCTAATTGCACCTCATGGAAATCTAAAATCCTCAAATGTACTTCTAACACAAACATTTGAACCAATCCTCACAGATTATGGATTAGTACCTGTAACAAACCAAGATATGGCCAAGGACATAATGGTAATATACAAATCACCTGAATATTTACAACAAGGAAGAATCACAAAGAAAAGTGATGTTTGGTGTCTTGGAATATTAATATTGGAAATTTTAACTGGTAAATTTCCAGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAGTTGGGTGGATTCAGTAGTACCAGAGGAGTGGAATAGTTCAGTGTTTGATAAAGACATGGGTGAAACAGAGAATGGTGAGGGTGAGATgaaaaaacttttgaaaattgCAATGAGTTGTTGTGAAGGGGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTAGAGAAAATTCAAGAAGTGAAAGAGACAGATGAGACAAGTGacatgaaatga 1854 0.3608 MALINHIMNKKTIFILLLCVVSSYAASDAELLLKVKENLERPNNVLTSWNTTTSPCDGDHSNWYGVRCYQGKVWGLKLENMRLKGYIDIDSLKQLPYLRTISFMNNDFEGAWPDINKIFGLKSIFLSNNKFSGDIPGDAFEGMMWLKKIHLSNNQFTGVIPPSVVLCPRLMELRLDRNNFIGPLPHLRQAKLKSFTVANNQLHGPIPNTLSKIAVSSFSGNEGLCGTPLAACTAKKPSIASICVVGVVVCVALIVIGVTLGFILHRRRDREQSLGQENQPSDHINNKLGRGDVGNDSIRSTGSVSSTHSRRGDHLKLSFIKYDRERFDLQELLRANAEILGSGCYSSSYKASLTSGTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHQNLIPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQQLGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTQTFEPILTDYGLVPVTNQDMAKDIMVIYKSPEYLQQGRITKKSDVWCLGILILEILTGKFPATFLQQGKGSEVSLASWVDSVVPEEWNSSVFDKDMGETENGEGEMKKLLKIAMSCCEGDVDKRCDLKEAVEKIQEVKETDETSDMK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00319 617 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Tsu02g00319 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 613 - -
Tsu02g00319 617 MobiDBLite consensus disorder prediction 272 309 - -
Tsu02g00319 617 PANTHER LRR RECEPTOR-LIKE KINASE 13 613 - -
Tsu02g00319 617 SUPERFAMILY Protein kinase-like (PK-like) 337 606 IPR011009 -
Tsu02g00319 617 Gene3D Phosphorylase Kinase; domain 1 299 408 - -
Tsu02g00319 617 Pfam Protein tyrosine and serine/threonine kinase 338 603 IPR001245 GO:0004672|GO:0006468
Tsu02g00319 617 Gene3D Ribonuclease Inhibitor 27 188 IPR032675 -
Tsu02g00319 617 SUPERFAMILY L domain-like 25 229 - -
Tsu02g00319 617 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Tsu02g00319 617 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00319 617 Gene3D Transferase(Phosphotransferase) domain 1 409 617 - -
Tsu02g00319 617 Gene3D Ribonuclease Inhibitor 192 232 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00319 Tsu-Chr2 2686383 2689159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00319 13 615 Receptor kinase-like Gene Family AT5G35390 52.389 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu02g00319 PK_Tyr_Ser-Thr 5.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00319 - - gmx:100804368 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00319 02 2686383 2689159 Tsu02g00319 02 2686383 2689159 ECH