Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00317 atgtcaaGGTCTATTCAAGAGAAGAAGCTTGGTACAGGACGTGTCGTCGCAGTTGCAATTGAGAATAATAAAACAAGCCAATATGCAGCTAAATGGGCTGTTGATAATCTTCTTCCTAAAGATCAACATTTATTATTAGTTCATGTTAGACAAAAGGCTTCTTCAATTCCTACAACAaCTGGAAATCATGTACCTATTGATGGCAATGATGATTTGGCTAGAGCTTACATGCAACAAATGGACAATGAATCTAAGGAGCTTTTCGCTTCATTTCGTGTATTCTGCAATAGAAAGAATATACAATGCAAAGAAATATTGTTGGAGGACTTGGATATATCTAAGGCAATCATAGAAGGTGTTACAACATATTCCATTGAGCTTCTGGTTCTTGGATCACCATCAAAGAGTGGTCTTGTAAGAAGATTTAGGACAACTGATGTTCCTAGTCTTGTGTCGAAAGGGGCACCTCCATTCTGCACGGTGTACATTATTTCTAAGGGAAAAATCTCATCTGTGAAAACTGCTACTTCTCCATTACCTGTGAAATCCGTACTGCGTGCATTGCCGCCACCACAACAGCTACAAAGTCCTGATAGAATGGATCTACATTCACTAATGCGAAACCACCCACCACGATCATCAGCAGAGAAGCTAACACAGCATACAAGCCATCATCAACACCATCAAGATGAAATCATATCACCATTTACAAGAGGTGCAAGACCGACACACAGATCGTACGAGTCCACAATCTCTGACTCCGATATCTCATTCGTGAGCAGTGGAAGACCGAGTGTTGATAGGATGTTCCCTTCTTTGTATGAAGAAATGGACTCTGGAAGTGGACTCACTCCCCGGTTTTCAGGAAGCTCAGACAGAAGCTTCGGTTCGTCTTTCTCAGGTGCTAAGTCAATTGATCAATCTGAATACTCATTCAGTTCACAAGACAGTGGGAATGGGTCCATGTCATCACAACCAAGGATATCAAGCTCGGATGAAGTGGAAGCTGAAATGAGGAGATTGAGGTTAGAGCTGAAGCAAACAATGGAAATGTATAGTACAGCTTGCAAGGAAGCACTGACAGCTAAACAAAAGGCAATGGAACTTCAGCGTTGGAAATTAGACGAACAAAGGAAATTGGAAGATGCGCGATTCTCTGAAGAAACAGCATTGGCGGTAGCTGAGAAAGAGAAAGCAAAAAGTAAAGTTGCCATGGAGGCAGCAGAAGCATCTCGAAAAATCGCAGAGTTGGAAGCACAGAAACGAGTGAATGCAGAAATGAAACCTCACTCAGATTCTGATCAGAGGAAGAGGACAGGaagtggaggaggaggaggagacaATTTTTTACATGGTGCCCGGTACAGAAGATACACTATTGAGGAAATCGAAGAAGCAACAAACTACTTTTCCAACTCACTGAAAATTGGAGAAGGGGGTTATGGACCAGTCTATAGGGCTGAACTAGATCACACTGCAGTTGCTATAAAAGTGTTAAAACCTGATGCAGCTCAAGGACGATCACAGTTTCAACAAGAGGTTGAAGTGCTGAGTAGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGTCCAGAGTTCGGTTGCCTAGTGTATGAGCACATGAGTAATGGAAGCTTGGATGATTGCCTCTTCAGGAGAAATAATAAAATGCCAGTTCTACCATGGCAACTACGATTCCGAATCGCAGCGGAGATTGCCACCGGTCTCCTTTTCCTTCACCAGACAAAACCAGAACCATTAGTGCACCGTGACTTAAAACCTGGAAATATTTTGCTTGACCGAAACTATGTGAGCAAGATCAGTGATGTTGGGTTGGCAAGGCTTGTCCCTCCTTCGGTTGCAGACACCGTGACACAGTATCGCATGACAGCAACTGCTGGAACTTTCTGTTACATTGATCCAGAGTACCAACAAACAGGCATGCTCGGAACAAAGTCTGATATTTACTCACTTGGAATCATGCTTCTACAGATGATAACAGCAAAACCACCAATGGGTTTGAGTCACCATGTTTCAAGATCTATTGAGAAAGGTACTTTTCGTGAGATGCTTGACCCTGCTGTTGAGGATTGGCCAGTTGAACATGCAATGCATTTTGCCAAGCTTGCTCTTCAGTGTGCTGAAATGAGAAGAAAAGACAGACCTGATCTTGGGAAAGTTATTTTGCCTGAGCTTAACAAACTCAGAGATTTTGCCGATGATAACATGcctatgatgatgatgatgtttggTGCAAGAACTAACAATGTTTACTCACGAACCGGATTTTCCTCATCAAATCAAGACACAATGAGTGAATCCCAATCAATGTCTGGAATGTCAGGATATGAAAGCAACTCAAGTTCATCATCATTGGGAAAAATGTAA 2394 0.414 MSRSIQEKKLGTGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQKASSIPTTTGNHVPIDGNDDLARAYMQQMDNESKELFASFRVFCNRKNIQCKEILLEDLDISKAIIEGVTTYSIELLVLGSPSKSGLVRRFRTTDVPSLVSKGAPPFCTVYIISKGKISSVKTATSPLPVKSVLRALPPPQQLQSPDRMDLHSLMRNHPPRSSAEKLTQHTSHHQHHQDEIISPFTRGARPTHRSYESTISDSDISFVSSGRPSVDRMFPSLYEEMDSGSGLTPRFSGSSDRSFGSSFSGAKSIDQSEYSFSSQDSGNGSMSSQPRISSSDEVEAEMRRLRLELKQTMEMYSTACKEALTAKQKAMELQRWKLDEQRKLEDARFSEETALAVAEKEKAKSKVAMEAAEASRKIAELEAQKRVNAEMKPHSDSDQRKRTGSGGGGGDNFLHGARYRRYTIEEIEEATNYFSNSLKIGEGGYGPVYRAELDHTAVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPNMVLLLGACPEFGCLVYEHMSNGSLDDCLFRRNNKMPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQMITAKPPMGLSHHVSRSIEKGTFREMLDPAVEDWPVEHAMHFAKLALQCAEMRRKDRPDLGKVILPELNKLRDFADDNMPMMMMMFGARTNNVYSRTGFSSSNQDTMSESQSMSGMSGYESNSSSSSLGKM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00317 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Tsu02g00317 797 MobiDBLite consensus disorder prediction 277 335 - -
Tsu02g00317 797 Pfam Protein kinase domain 473 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00317 797 PANTHER OS02G0152300 PROTEIN 1 796 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 763 797 - -
Tsu02g00317 797 SMART serkin_6 470 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00317 797 Coils Coil 391 420 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 283 331 - -
Tsu02g00317 797 ProSiteProfiles Protein kinase domain profile. 470 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00317 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 147 - -
Tsu02g00317 797 Pfam Universal stress protein family 14 142 IPR006016 -
Tsu02g00317 797 CDD STK_N 15 167 - -
Tsu02g00317 797 Gene3D Transferase(Phosphotransferase) domain 1 543 751 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 419 437 - -
Tsu02g00317 797 Gene3D Phosphorylase Kinase; domain 1 451 542 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 419 448 - -
Tsu02g00317 797 Gene3D HUPs 14 164 IPR014729 -
Tsu02g00317 797 Coils Coil 331 351 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 183 249 - -
Tsu02g00317 797 MobiDBLite consensus disorder prediction 218 234 - -
Tsu02g00317 797 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 796 - -
Tsu02g00317 797 SUPERFAMILY Protein kinase-like (PK-like) 451 729 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00317 Tsu-Chr2 2676322 2680310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00317 16 781 Receptor kinase-like Gene Family AT5G35380 55.284 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tsu02g00317 Pkinase 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00317 - - gmx:100803837 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00317 02 2676322 2680310 Tsu02g00317 02 2676322 2680310 ECH