Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00305 ATGGCAGGTACGATGAAGAAAGTCGACACAATTCGTCAAATCGTTCGTTTGAAACAACTCATGACACGCTGGAAACAAATCAGTCTCCGTCGTCGTTCACTTCGTTCCGAACCTGAAGAAgaaacaccaacaacaacaaccgaACCATGTGTTACTCCTCGGAAACAACCACCATCAGGTTTTGTTTTCGTTTATGTTGGATCGGAACGACACCGTTTTGCTATTCCTGCTAGGTTTCTTAACTTTCCTGTTTTCGCTGGTCTTCTCGATGTAACCGAGGAAGAGTTTGGTTTAAGAGGTAACGGCGgtttagttcttccttgccaCGTGGAGTTTTTCACGGAAATCGTTAAATGTCTTCATAAGAATGAAAATAAGTATGGGAAACTTTCTTTGGAAGCGTTTGTTAAAATGTTTTCTGACGTGGCGTTTGATTCTTCttgtaaagaaaaagaaaacgtCGTCGTTTTGGCTCCTTTGTTGCAGAAGGCTTTTGTCTAG 501 0.3713 MAGTMKKVDTIRQIVRLKQLMTRWKQISLRRRSLRSEPEEETPTTTTEPCVTPRKQPPSGFVFVYVGSERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVEFFTEIVKCLHKNENKYGKLSLEAFVKMFSDVAFDSSCKEKENVVVLAPLLQKAFV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00305 166 Pfam Auxin responsive protein 23 120 IPR003676 GO:0009733
Tsu02g00305 166 MobiDBLite consensus disorder prediction 31 52 - -
Tsu02g00305 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 154 IPR003676 GO:0009733
Tsu02g00305 166 PANTHER - 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00305 Tsu-Chr2 2570567 2571473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00305 7 123 Calmodulin-binding Proteins AT3G43120 32.609 6.04e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00305 K14488 - gmx:100793118 184.111