Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00296 ATGAATAGACAAAAGGGTCATCATTATGATGAAGATAtgagttcttcttcttcttctaaggttattgttgttgctgttaaagcttcaaaagatatttcaaGAACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCTGGAGATTGCATTAAGCTTTTGGTTATCATTCCTGCACTTTCATCAAgaaaaaaagtATGGGGGTTTTCAAGATTTACTACTGATTGTGCCACTAATCACTGGACATCGCGATTAGGAACGGTTTCAGATCAGAAAGAAGATATTACAAATTCATGTTCTCAATTAGTGCTTCAACTACATGATTTTTATGATCCAGAGAAGATAAAGATTAGAGTGAAGATTCTTTCTGGTTCTTTGTGTGGCGCGGTGGCTGCTGAAGCCAAGAGAGTGCAGTCAAGTTGGGTTGTATTGGATAGAAAATTGAAAGGTGAAAAGAAATACTGCATGGAGGAGCTGCATTGCAATATTGTAATTATGAAGCATTCTCACCCGAAGATTCTACGCTTGAATCTGAATAGTTCTCCTAAGAAGGAACTTGGTAGAGATTGTGCATTTTCGTTGGAGCCGAATGCATacataacaaacttaaaagacAATTTTGAACATTCAGATATAATTAAAGGTCCAGCAGTTACTCCGGCTAGTAGTCCAGAACAAGGCTCACCACCATTGACTGTAACTGATATTGGAACAGCGTCGATATCGAGCTCAGATCCTGGAACATCGCCATTTTTCCATTCTGACAATTACGATAGACGGAGGAGATGTTTTCCCTTTGTTGTTCACGAGGGACTGACAAACCTCGAGGATATTGTATCTGACTCGGAGAGTGAAAAGCTAAGTTCATCATCCAAAAGTTCATCTTTTCAGCCATGGATTTCAAATGTAATTTGTGTAGACGGCGAGTTCTCAAAACATGAAGAGAATATTAAAAGATCTAGTGATAAGTCTTTGGTTTCTACCTATGAATCTTTGCTTCAGAAATTGACGATGTTGGATCAAGATCATATCTATGGAATGCCTACTTGTAAAATTGATGTGAACTTGAGCAAGAGTGTTAGAGAAGTAATTTCACTATCCAGAAATGCTCCTCATGGGCCTCCTCCATTGTGCTCTATTTGTAACCACAAAGCACCTGCATTCGGGAATCCTCCAAGGTGGTTTACGTTTGCGGAACTACAGCTCGCCACAGGTGGTTTTTCGCAAGCAAACTTCTTGGCCGAAGGTGGTTTTGGTTCTGTACACCGTGGTGTCCTACCGGATGGACAAGTAGTTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGCTGCGCACAACACCGCAATGTTGTGATGCTAATTGGTTTCTGTGTTGAGGATGGAAGAAGATTGCTAGTTTATGAGTATATCTGCAATGGATCCCTCGATTCTCATCTATACGGACGAATGCAGAATGTGCTGGATTGGTCTGCACGCCAGAAAATTGCGGTTGGAGCAGCACGTGGTTTGAGATATCTTCATGAAGAATGTAGAGTTGGTTGCATTGTACACCGTGATTTGCGACCTAACAATATCCTCCTCACTCACGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGACGGAGATATGGGCGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTATTACTGGAACTTGTGACAGGTCGGAAAGCTGTGGATATTAGCCGGCCGAGGGGCCAGCAATGCCTTAGTGAATGGGCACGCCCGTTGCTTGAAGAACAAGCCATTCATAAGCTTGTAGATCCGAGCATAGGAAACTGCTATGTTGATCAAGAGGTTTACCGCATGATGCAGTGTTCCTCTATGTGCATTCGACGGGATCCTCATTTAAGGCCTCGAGTGTCTCAGGTCCTCAAGATGCTTGAAGGTGACATTCTCATGTGA 2052 0.405 MNRQKGHHYDEDMSSSSSSKVIVVAVKASKDISRTALVWALTHVVQPGDCIKLLVIIPALSSRKKVWGFSRFTTDCATNHWTSRLGTVSDQKEDITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVVLDRKLKGEKKYCMEELHCNIVIMKHSHPKILRLNLNSSPKKELGRDCAFSLEPNAYITNLKDNFEHSDIIKGPAVTPASSPEQGSPPLTVTDIGTASISSSDPGTSPFFHSDNYDRRRRCFPFVVHEGLTNLEDIVSDSESEKLSSSSKSSSFQPWISNVICVDGEFSKHEENIKRSSDKSLVSTYESLLQKLTMLDQDHIYGMPTCKIDVNLSKSVREVISLSRNAPHGPPPLCSICNHKAPAFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRMQNVLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDISRPRGQQCLSEWARPLLEEQAIHKLVDPSIGNCYVDQEVYRMMQCSSMCIRRDPHLRPRVSQVLKMLEGDILM 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00296 683 CDD STKc_IRAK 413 679 - -
Tsu02g00296 683 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 683 - -
Tsu02g00296 683 Pfam Protein tyrosine and serine/threonine kinase 411 677 IPR001245 GO:0004672|GO:0006468
Tsu02g00296 683 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Tsu02g00296 683 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Tsu02g00296 683 SMART tyrkin_6 407 677 IPR020635 GO:0004713|GO:0006468
Tsu02g00296 683 MobiDBLite consensus disorder prediction 221 251 - -
Tsu02g00296 683 MobiDBLite consensus disorder prediction 214 252 - -
Tsu02g00296 683 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00296 683 Gene3D Transferase(Phosphotransferase) domain 1 483 681 - -
Tsu02g00296 683 PANTHER OS01G0253100 PROTEIN 17 683 IPR045271 GO:0004714|GO:0006468
Tsu02g00296 683 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Tsu02g00296 683 Gene3D HUPs 4 176 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00296 Tsu-Chr2 2488151 2492044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00296 357 673 Trihelix Transcription Factor Family AT1G68690 49.844 1.23e-102 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tsu02g00296 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00296 - - aprc:113855006 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00296 02 2488151 2492044 Tsu02g00296 02 2488151 2492044 ECH