Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00290 ATGGACAATCCTTATCCCAATCCAATTATTTTGCAGAGTGAGGGCTTACTCAAGTATATACTAGAAACTAGTGTTTACCCACGAGAAGCAGAGACGCTCAAAGAGCTGAGGAATGCAACCACAAAACATCCTCTTGGTTTCATGGGCACTTCACCTGATGCGGGTCAACTAATGGCGTTGCTCTTGAAACTTCTAAATGCGAAGAAGACAATCGAAATAGGAGTTTTCACTGGATACTCTCTTCTCCTCACTGCACTTAACATTCCTCATGATGGAAAGGTTACAGCCATAGATCTGGACAGAAAATCCTATGAGATGGGACTCCCATTCATAAAAAAGGCTGGTGTTTTACACAAGATTGACTATATAGAGTCCCTAGCTTTGCCAGTTCTTGATAAACTCCTACAAGATCCTGCAAATGAAGGAACTTTTGACTTTGCCTTTGTTGATGCTGACAAAAATAACTACTTGAATTACCATGAGAGGCTTCTCAAGTTAGTTAAGATTGGTGGAATTATTGCCTACGATAACACACTTTGGGGAGGAACTGTTGCTTTGCCAGAAATGGCAGTTTCAGAACCAAAGAGAGATTGGAGAAGAGCTGTACTTGATGTCAACAAAGCAATTTCAAAGGATTCTCGTCTGGAAATTGCTTTGGTTTCAATAGGCGACGGATTAACTATCTGCAGGCGCGTTCGctga 702 0.4117 MDNPYPNPIILQSEGLLKYILETSVYPREAETLKELRNATTKHPLGFMGTSPDAGQLMALLLKLLNAKKTIEIGVFTGYSLLLTALNIPHDGKVTAIDLDRKSYEMGLPFIKKAGVLHKIDYIESLALPVLDKLLQDPANEGTFDFAFVDADKNNYLNYHERLLKLVKIGGIIAYDNTLWGGTVALPEMAVSEPKRDWRRAVLDVNKAISKDSRLEIALVSIGDGLTICRRVR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00290 233 PANTHER O-METHYLTRANSFERASE-RELATED 6 233 - -
Tsu02g00290 233 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 231 IPR029063 -
Tsu02g00290 233 CDD AdoMet_MTases 71 175 - -
Tsu02g00290 233 Gene3D Vaccinia Virus protein VP39 5 233 IPR029063 -
Tsu02g00290 233 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 232 IPR002935 GO:0008171
Tsu02g00290 233 Pfam O-methyltransferase 22 232 IPR002935 GO:0008171
Tsu02g00290 233 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 6 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00290 Tsu-Chr2 2428893 2430663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00290 10 232 Monolignol Biosynthesis Gene Families AT4G26220 65.022 5.10e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00290 K00588 - gmx:100795229 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00290 02 2428893 2430663 Tsu02g00290 02 2428893 2430663 ECH