Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00287 ATGGAATTACTTCCATCAGAAGCAGCAGCTCCGATCTCAATAAAACAAAGGTTCCGATCGCTGAAACTCGTTAACACCGACATGAACCAACTCCTCACTCGTCAACCCGTCGGCGTCGACTTCGGCACACTCGATAACGGCCTTCGCTACTACGTTCGTTGCAATTCCAAACCACGTATGAGAGCCGCTCTTGCACTTGCCGTCAGAGTCGGATCAGttcttgaagaagaagatgaacgTGGAGTTGCTCACATTGTTGAGCATCTTGCTTTTAGTGCTACAAAGAGATATAATAATCATGATATTGTTAAGTTCCTTGAAAGTATTGGAGCTGAATTTGGTGCTTGTCAGAATGCCGTTACATCTTCTGATGATACTGTTTACGAGCTGTTGGTTCCCGTTGATAAGCCGGAGCTTTTGTCTCAGGCCATTTCGGTTTTGGCAGAATTCAGTTCAGAGATTCGAGTATCGAAAGATGACTTGGAGAAAGAAAGAGGAGCTGTCATGGAAGAGTACAGAGGAAGCAGAAATGCAACGGGGAGGCTGCAGGATGCTCATTGGATTTTGTTGATGGAAGGTTCAAAGTATGCTGAAAGGTCACCAATTGGACTTGAGAAAGTGATTCGGACGGTTTCTCCTGAGACTGTGAGGCATTTTTACAAGAAATGGTACCATTTATGTAATATGGCTGTCATTGCAGTTGGAGATTTTTCTGATACACagAGTGTAGTTGAGTTGATAAAGACTCATTTTGGCCAGAAAATTCCTGCACCTGATCCTCCACCCGTACCAACATTCCAGGTTCCATCACATGATGAGCCACGGTTTTCTTGTTTTGTTGAATCTGAAGCTGCCGGGTCTGCAGTTATGATTAGTTATAAGATGCCAGCAAATGAGCTTAAAACAGTAAAAGACTACAGAGATATACTTGCAGAATCCATGTTCCTGTATGCATTAAACCAGAGATTCTTTAAAATATCCCGTAGGAAAGATCCACCCTATTTCTCATGCTCAGCTTCTGCTGATGTTCTAGTCCGTCCAGTAAAGGCCAATATTATAACTTCATCATGTAGAGGAAAAGGAACTCTTGAAGCCCTCGAATCAATGTTAATAGAGGTTGCAAGGGTGCGGCTTCATGGCTTTTCAGATCGTGAAATATCTATAGTCCGTGCACTGCTGATGTCAGAGATTGAATCTGCCTATTTGGAGCGAGATCAAATTCAATCTACCAGTTTGAGAGATGAATATCTACAAcATTTTCTCCACAATGAACCTGTTGTTGGTATTGAGTATGAAGCTCAACTCCAGAAGACTCTTCTACCACATATATCAGCATTAGAGGTCTCTAAATGTTCTGAGAAATTACGGACCTCTTGTAGCTGTGTCATAAAGACCATTGAGCCCCAAGCATTTGCTGTGTCTGATGACCTGAAAAATGTTGTTAAGAAAGTCAATCTTCTTGAGCAAGAGGGTGGAATTTCTCCGTGGGATGAAGAACATATTCCAGAAGAAATTGTCACTACAAAGCCAAATATGGGGCATGTTGTGAAGGAATTGGAATACTCAAATATTGGAGCTACTGAACTAATTCTGTCAAATGGGATGCGGATCTGCTATAAGCGTACAGACTTCCTTGATGATCAGGTTCTCTTCACGGGCTATTCATATGGCGGCTTGTCTGAACTACCAGAAAGCGAGTATTTCTCTTGCTCAATGGGACCAACCATTGCTGGGGAAATTGGCGTGTTTGGTTATAGACCATCTGTCCTAATGGACATGCTTGCTGGGAAAAGAGCTGAAGTTGGCACCAAGATTGGTGCATATATGAGAACGTTTTATGGTGATTGTTCACCTTCAGACCTGGAAACTGGCTTGCagcTTGTCTATCAGCTGTTTACAACAAATTTAACCCCAGGCGAAGAAGATGTCAAAATAGTGATGCAAATGGCTGAAGAAGCGGTCTGTGCTCAAGATAGGGATCCGTATACTGCTTTTACAAAACGTGTAAAGGAGCTTAATTATGGAAACTCCTATTTTTTTAGGCCAATTAAAAAATGTGACCTACAAAAGGTTGATCCTCTTAAAGCTTGTGAATACTTCAGCAAATGTTTCAGAGATCCTTCAGCTTTTACTGTTGTGATTGTTGGGAACATTGATCCTACTGTTGCACTGCCCTTAATATTGCTGTACCTAGGCGGAATACCAAAGCCTCCTGAACCTATTATGCATCTTAACCGTGATGAGCTGAAAGGATTGCCTTTCACTTTTCCAACAACCATCCATAGAGAAGTGGTCCGAAGTCCTATGGTGGAAGCACAATGTTTGGTGCAGATATGCTTTCCTGTGGAGCTGAAGAATGGGACCATGGTAGAAGAGATCCACTTTGTTGGGTTCCTGAGCAAGCTTctggaaacaaaaataatgcAGGTTCTCCGTTTCAAGCATGGGCAGATATACTCTGTAGGTGTTTCGGTATTCCTTGGCGGTAATAAACCTTCAAGAACCGGTATTGTTCGTGGAGACATTAGCATAAGTTTCTCATGTGATCCAGAGATATCTTCCAAGCTGGCAAATATTGCTTTGGACGAAATGTTGCGTCTTCAAGAGGAAGGGCCTACAGAACAGGATGTTTCAACTGTACTTGAAATTGAGCAAAGAGCGCATGAAAATGGATTGCAGGAAAATTATTACTGGCTGGACAGGATTTTACACAGCTACCAATCAAGAGTCTATTCTGGTGACGTTGGCACTTCTTTTGAAATTCAAGCTAAAGGGCGGTCAAAAGTGAGATCATCCCTTACACCATCAACTGCACAGTTGGCACTACAAAGAATATTGCCTTATCCTTGCAAAAAACAGTATACTGCAGTGATTCTTATGCCAAAGTCTTCTACTTTTAAATTCCTGAAGTCAGTATTCCAATCTACTCGAACAAATTGTGGCAGAGAAGCAAAGATTTTAGCTGGGGTTGCTGGGCTGGTAGCATTGGCTCTTAGTTTGTGGAGACATTCACGCAGTGGCCATATTTTTCACAAATTAGTAGTTTTGATAGACACAGTTCCTGGACAGATCGTGGTAAAAATGGTGGAGAAGACCAGCGCCGGTAGGAAGGAGGAGGTTGTTACCAGGGAATACACCATCAACCTCCACAAACGCCTCCATGGATGCACATTTAAGAAGAAGGCTCCTAAAGCTATTAAGGAGATAAGGAAGTTTGCCCAAAAGGCTATGGGAACCACTGATGTCCGAGTTGATGTCAAGTTGAACAAAGCTATATGGAGCCAGGGGATCAGAAGTGTCCCAAGGAGGGTTAGAGTGCGCATTGCCCGTAAGAGAAATGATGACGAGGATGCTAAGGAAGAGCTCTACTCTCTTGTTACAGTTGTTGAAATCCCGAAGGAAGAGCTAAAAGGTTTGGGCACTAAGGTTATTGATGATGAGGATTGA 3447 0.4209 MELLPSEAAAPISIKQRFRSLKLVNTDMNQLLTRQPVGVDFGTLDNGLRYYVRCNSKPRMRAALALAVRVGSVLEEEDERGVAHIVEHLAFSATKRYNNHDIVKFLESIGAEFGACQNAVTSSDDTVYELLVPVDKPELLSQAISVLAEFSSEIRVSKDDLEKERGAVMEEYRGSRNATGRLQDAHWILLMEGSKYAERSPIGLEKVIRTVSPETVRHFYKKWYHLCNMAVIAVGDFSDTQSVVELIKTHFGQKIPAPDPPPVPTFQVPSHDEPRFSCFVESEAAGSAVMISYKMPANELKTVKDYRDILAESMFLYALNQRFFKISRRKDPPYFSCSASADVLVRPVKANIITSSCRGKGTLEALESMLIEVARVRLHGFSDREISIVRALLMSEIESAYLERDQIQSTSLRDEYLQHFLHNEPVVGIEYEAQLQKTLLPHISALEVSKCSEKLRTSCSCVIKTIEPQAFAVSDDLKNVVKKVNLLEQEGGISPWDEEHIPEEIVTTKPNMGHVVKELEYSNIGATELILSNGMRICYKRTDFLDDQVLFTGYSYGGLSELPESEYFSCSMGPTIAGEIGVFGYRPSVLMDMLAGKRAEVGTKIGAYMRTFYGDCSPSDLETGLQLVYQLFTTNLTPGEEDVKIVMQMAEEAVCAQDRDPYTAFTKRVKELNYGNSYFFRPIKKCDLQKVDPLKACEYFSKCFRDPSAFTVVIVGNIDPTVALPLILLYLGGIPKPPEPIMHLNRDELKGLPFTFPTTIHREVVRSPMVEAQCLVQICFPVELKNGTMVEEIHFVGFLSKLLETKIMQVLRFKHGQIYSVGVSVFLGGNKPSRTGIVRGDISISFSCDPEISSKLANIALDEMLRLQEEGPTEQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEIQAKGRSKVRSSLTPSTAQLALQRILPYPCKKQYTAVILMPKSSTFKFLKSVFQSTRTNCGREAKILAGVAGLVALALSLWRHSRSGHIFHKLVVLIDTVPGQIVVKMVEKTSAGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKAIWSQGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00287 1148 Pfam Insulinase (Peptidase family M16) 56 173 IPR011765 -
Tsu02g00287 1148 ProSitePatterns Insulinase family, zinc-binding region signature. 71 94 IPR001431 GO:0004222|GO:0006508
Tsu02g00287 1148 Gene3D - 795 964 - -
Tsu02g00287 1148 Gene3D - 1036 1148 IPR023621 -
Tsu02g00287 1148 CDD Ribosomal_L31e 1037 1097 IPR000054 GO:0003735|GO:0005840|GO:0006412
Tsu02g00287 1148 Gene3D - 531 738 - -
Tsu02g00287 1148 Pfam Peptidase M16 inactive domain 211 390 IPR007863 -
Tsu02g00287 1148 Pfam Peptidase M16 inactive domain 699 879 IPR007863 -
Tsu02g00287 1148 SUPERFAMILY Ribosomal protein L31e 1039 1120 IPR023621 -
Tsu02g00287 1148 SUPERFAMILY LuxS/MPP-like metallohydrolase 764 907 IPR011249 GO:0046872
Tsu02g00287 1148 SUPERFAMILY LuxS/MPP-like metallohydrolase 510 740 IPR011249 GO:0046872
Tsu02g00287 1148 Pfam Ribosomal protein L31e 1039 1120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Tsu02g00287 1148 Gene3D - 277 468 - -
Tsu02g00287 1148 ProSitePatterns Ribosomal protein L31e signature. 1082 1096 IPR020052 GO:0003735|GO:0005840|GO:0006412
Tsu02g00287 1148 Gene3D - 22 262 - -
Tsu02g00287 1148 SUPERFAMILY LuxS/MPP-like metallohydrolase 39 264 IPR011249 GO:0046872
Tsu02g00287 1148 PANTHER NARDILYSIN 2 991 - -
Tsu02g00287 1148 SMART Ribosomal_L31e_2 1038 1121 IPR000054 GO:0003735|GO:0005840|GO:0006412
Tsu02g00287 1148 PANTHER ZINC PROTEASE PQQL-LIKE 2 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00287 Tsu-Chr2 2406687 2417844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00287 1035 1148 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.456 1.96e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00287 - - aprc:113856100 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00287 02 2406687 2417844 Tsu02g00287 02 2406687 2417844 ECH