Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00274 ATGGTTGATGCAAAGAGAGCGTTGGTTGGAGCAGGTGCACGGATCTTGTTTTATCCAACACTTTTGTATAACGTGGTTCGTAATAAAATTGAAGCTGAATTCAGGTGGTGGGATCAAATTGATGAGtttttgttgCTGGGCGCAGTCCCATTCCCTAAAGATGTTCCTCAATTGAAGAACCTTGGTGTTGGCGGTGTGATTACGTTGAATGAACCTTATGAAACTTTGGTACCATCTTCATTATATCATGCTCATGGGATCGATCATTTGGTAATTCCTACAAGGGATTATCTCTTTGCTCCCTCATTCGTGGATATCAACCGGGCAGTGCAGTTCATTCATTATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGAAGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATATAAGCACATGACACCTGCTGCTGCCCTGGATTATGTGCGGTCTCGAAGACCTAGAGTGCTACTGGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCAAAGACCTGTTCAAAACAATAACAAGCAAATATCTGTTCAAAACTATAACAAGCAAAGACCGTGTTCGTTACCATACTCTCCCTCTGGGGACACAGTTCTCATAACCAAAGATGATCTTGAAGGCTATCATAGTACATCTGATACTAGTATGGAATTGGCTATTGTTCCTAAAGTGGCAAAGACTAAGCCCATGATAGCAAGACTATCTTGCCTGTTCGCATCCTTAAAGGTATCCGGTAGTAGTGTGCCAATGACAAGGCGGCTGCCAGTTTCAGAGTCACGTGCTTGCTAA 831 0.4224 MVDAKRALVGAGARILFYPTLLYNVVRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPQLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDINRAVQFIHYNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALDYVRSRRPRVLLAPSQWKAVQNYNKQRPVQNNNKQISVQNYNKQRPCSLPYSPSGDTVLITKDDLEGYHSTSDTSMELAIVPKVAKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00274 276 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 179 IPR029021 -
Tsu02g00274 276 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 183 IPR020422 GO:0006470|GO:0008138
Tsu02g00274 276 PANTHER OS01G0739200 PROTEIN 2 276 - -
Tsu02g00274 276 ProSitePatterns Tyrosine specific protein phosphatases active site. 125 135 IPR016130 GO:0016311|GO:0016791
Tsu02g00274 276 Gene3D Protein tyrosine phosphatase superfamily 36 184 IPR029021 -
Tsu02g00274 276 PANTHER - 2 276 - -
Tsu02g00274 276 CDD PTPMT1 36 180 IPR044596 GO:0004721
Tsu02g00274 276 SMART dsp_5 39 180 IPR020422 GO:0006470|GO:0008138
Tsu02g00274 276 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0008138|GO:0016311
Tsu02g00274 276 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 104 172 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00274 Tsu-Chr2 2292054 2293895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00274 5 264 Protein tyrosine phosphatase (PTP) family AT2G35680 55.594 2.25e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00274 - - gmx:100817410 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00274 02 2292054 2293895 Tsu02g00274 02 2292054 2293895 ECH