Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00269 ATGCTATCATCAAGTAACAGTTTCCATCTCCAGAAGAGTCGCGGCTCAGCATGTGCTTATCCAGCTGCCCGTATCAGGAAACATAACTGGAGTGGGAAGGCTATTAGGAGAAAGACTACTGAGACTGATAGAATGAAGAGAAGGATCCATGAAAATGGAGGTGCAGAGGAGTTTATAGTGCAATTTGCTGTGGAGATTTGGAGTCAAGCAGGAAATTCCATGGATTCTAATGCTCCATTTGAGGAAAAGATCGAGATCGCCGTCGCAGCTAACTTCATCCCGATGTGCATCCATATGTGA 300 0.45 MLSSSNSFHLQKSRGSACAYPAARIRKHNWSGKAIRRKTTETDRMKRRIHENGGAEEFIVQFAVEIWSQAGNSMDSNAPFEEKIEIAVAANFIPMCIHM 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00269 99 PANTHER RIBOSOMAL PROTEIN L37 6 49 - -
Tsu02g00269 99 PANTHER 60S RIBOSOMAL PROTEIN L37 6 49 - -
Tsu02g00269 99 SUPERFAMILY Zn-binding ribosomal proteins 4 36 IPR011332 GO:0006412
Tsu02g00269 99 Pfam Ribosomal protein L37e 5 34 IPR001569 GO:0003735|GO:0005840|GO:0006412
Tsu02g00269 99 Gene3D - 3 54 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00269 Tsu-Chr2 2277501 2280063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00269 7 46 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 77.500 1.28e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00269 K02922 - dcr:108193712 71.6329