Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00263 atgaatttcattttctATGTTTTAGTACTTCTTGTTCTAGTTCTTCTACAAAATCCTAGTGTAACACAATGTCATACCAAAGGAATTAGACCAAGACCTTCTAATGGAAATGGAATTCCATTAATATCTACCAATATGACCAAAGTACAAGAATCAGAACAACAATTCATGAAATGGGTCAAATTTGTTGGTGGTCTTAAACACACTGTCTTTAGAACAGCTAAAAATAAGCTATTTCCTTCTTATACTTTGAatgtttataataaaaaatctgGTAAAGGAGGATTTTCATCTATTCAAGCTGCCATTGATTCTCTTCCATTCATCAATCTAGTTAGAGTTGTTATCAAAGTTCATGCAGGAGTTTATACAGAGAAAGTTAGCATTCCTGCATTTAAATCATTCATAACAATACAAGGAGCAGGTGCAGATAAAACAATTGTTCAATGGGGTGACACTGCTCAAACACCTAATCCTAGTGCAAAAGGACAGACACTAGGAACCTATGGTTCAGCAACTTTTGCAGTCAATTCACCTTATTTCATTGCTAAGAACATCACATTCAAAAACACTGCTCCAATTCCAGCACCAGGAGCAGTTGGAAAACAAGGAGTGGCATTGAGAATTTCAGCAgataatgcaatgttcctaGGTTGCAAATTCTTAGGAGCACAGGATACATTGTATGATCATATTGGTAGGCACTATTACAAAGATTGTTACATTGAAGGCTCTGTTGATTTCATATTTGGCAATGCTCTTTCTCTTTTTGAGGGTTGTCACGTGCATGCAATAGCACAAAATACAGGAGCACTAACAGCACAAGGAAGGAGCAGTTTATTAGAAGACACGGGATTCTCGTTTGTACACTGTAAGGTCACGGGATCAGGAGCACTATACCTTGGAAGGGCTTGGGGTCCCTTCTCTAGAGTTGTCTTTGCTTACACTTACATGGACAATATCATCATTCCCAAAGGATGGTATAATTGGGGTGATCCCAACCGTGAAATGACTGTATTCTATGGACAATACAAATGTACTGGAGCAGGAGCAAGCTATGCAGGGAGGGTATCATGGTCAAGGGAACTCACTGATGAAGAAGCTAAACCATTTATTTCACTTAGCTATATTGATGGGTCTGAATGGATTAATTCTTTCATATGA 1164 0.366 MNFIFYVLVLLVLVLLQNPSVTQCHTKGIRPRPSNGNGIPLISTNMTKVQESEQQFMKWVKFVGGLKHTVFRTAKNKLFPSYTLNVYNKKSGKGGFSSIQAAIDSLPFINLVRVVIKVHAGVYTEKVSIPAFKSFITIQGAGADKTIVQWGDTAQTPNPSAKGQTLGTYGSATFAVNSPYFIAKNITFKNTAPIPAPGAVGKQGVALRISADNAMFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNTGALTAQGRSSLLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASYAGRVSWSRELTDEEAKPFISLSYIDGSEWINSFI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00263 387 ProSitePatterns Pectinesterase signature 2. 242 251 IPR033131 -
Tsu02g00263 387 PANTHER PECTINESTERASE 2 386 - -
Tsu02g00263 387 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 386 - -
Tsu02g00263 387 Gene3D - 81 386 IPR012334 -
Tsu02g00263 387 Pfam Pectinesterase 89 379 IPR000070 GO:0030599|GO:0042545
Tsu02g00263 387 SUPERFAMILY Pectin lyase-like 83 385 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00263 Tsu-Chr2 2223028 2225839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00263 41 383 Carbohydrate Esterase AT5G47500 45.058 2.21e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00263 K01051 - gmx:100802832 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00263 02 2223028 2225839 Tsu02g00263 02 2223028 2225839 ECH