Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00262 ATGGGTAAAACCATAAGGTGGTTCAAGAGTTTGTTTGGGATAAAGAAAGATAAAGATAATTCAAATTCTTCAAGCAACAAGTTGAATCCTACTTCTCTTCAGGCTTTCTCAAAGAGAGATTCAAGAGGTTTGTGTCATAATCCATCTACCATACCACCCAACATTTCACCTGCAGAAGCTGCTTGGGTTCAATCCTTCTACTCAGATTCCGAGAAGGAGCAAAACAAGCATGCCATTGCGGTCGCAGCTGCCACGGCAGCAGCTGCAGATGCTGCCGTGGCAGCTGCTCAAGCTGCCGTGGCTGTAGTTAGACTAACCAGCCACGGCAGAGACACAATGTTTGGTGGTGCACACCAGAAATTTGCAGCTGTCAAGATTCAAACCACATTTAGGGGTTTCTTGGCAAGAAAAGCATTGAAAGCATTAAAGGGTTTGGTAAAGTTACAAGCACTAGTGAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACACTACACAGTATGCAAGCACTAATTAGAGCACAAGCAACAGTAAGGTCTCATAAATCTCGTGGACTCATCATAAACACAACAAAGAATGAAACACATAACAACAGATTTCAAACACAAGCAAGAAGATCCACGGAAAGGTACAATCATAATGACAGTAATAGGAATGATTACACAGGTTCAATTCCAATTCACAGTAGAAGATTATCATCTTCTTTTGATGCTACTGTGAATAACAGTTATGATATTGGAAGTCCAAAAATAGTAGAAGTTGATACTGGAAGACCAAAATCAAGGTCTAGAAGAAGTAACACATCAATTTCAGATTTTGGCGACGACCCGTCATTTCAAACACTTTCATCTCCATTACCAATTACACCTTCTCAGTTATTTATTCCAACTCAAAGAAATTTCAATGAAACAGAATGGGGAATAACAGGAGAAGAATGCAGATTTTCGACCGCGCAAAGCACTCCGCGGTTTGCAAGTTCTTGTAGTTGTGGATTTGTTGCACCTTCCACACCTAAAACAATTTGTGGAGATAGTTATTATGTTGGTGATTATGGTAATTACCCTAATTACATGGCTAATACACAGTCTTTTAAGGCTAAATTGAGGTCTCATAGTGCTCCTAAACAACGACCTGAACCCGGTCCGAAGAAGAGGCTTTCATTAAATGAATTGATGGAATCTAGAAACAGTTTAAGTGGTGTTAGAATGCAGAGATCTTGTTCACAGATTCAGGATGCTATTAATTTTAAGAATGCTGTGATGAGTAAATTTGATAAGTCCATTGAATTTGATAGAAACAACTTCTCCAACCAGAGGAGGTGGTGA 1326 0.3982 MGKTIRWFKSLFGIKKDKDNSNSSSNKLNPTSLQAFSKRDSRGLCHNPSTIPPNISPAEAAWVQSFYSDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGAHQKFAAVKIQTTFRGFLARKALKALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLIINTTKNETHNNRFQTQARRSTERYNHNDSNRNDYTGSIPIHSRRLSSSFDATVNNSYDIGSPKIVEVDTGRPKSRSRRSNTSISDFGDDPSFQTLSSPLPITPSQLFIPTQRNFNETEWGITGEECRFSTAQSTPRFASSCSCGFVAPSTPKTICGDSYYVGDYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKFDKSIEFDRNNFSNQRRW 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00262 441 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Tsu02g00262 441 MobiDBLite consensus disorder prediction 249 282 - -
Tsu02g00262 441 Gene3D - 116 170 - -
Tsu02g00262 441 SMART iq_5 118 140 IPR000048 GO:0005515
Tsu02g00262 441 SMART iq_5 141 162 IPR000048 GO:0005515
Tsu02g00262 441 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Tsu02g00262 441 Pfam IQ calmodulin-binding motif 146 160 IPR000048 GO:0005515
Tsu02g00262 441 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Tsu02g00262 441 MobiDBLite consensus disorder prediction 191 226 - -
Tsu02g00262 441 Pfam Protein of unknown function (DUF4005) 322 399 IPR025064 -
Tsu02g00262 441 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 427 - -
Tsu02g00262 441 MobiDBLite consensus disorder prediction 191 205 - -
Tsu02g00262 441 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
Tsu02g00262 441 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00262 Tsu-Chr2 2216710 2219453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00262 1 403 IQD Protein Family AT3G16490 49.515 3.99e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00262 - - mtr:MTR_8g102400 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00262 02 2216710 2219453 Tsu02g00262 02 2216710 2219453 ECH