Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00252 ATGGAACCTTTGGACGATTCAGATGCGCAACTCGAACGAGTTGACTCTGATCAGTTAACGTCCACAAGCACCGGTTCAAGCATTTCATCCGTATTCAGCACTGACGATTTCCGTTACTTCAACAGTTCCGGTGACATTTCCTCTATCAGTAGCGGTTCAGGTGAGATTTCAACATTCACGGTTAACCGTCTGATTCTTGCACCTCCGTTGATCACTGTATCTAGTGAAGCGGATAACGAGACTGCCGTTCCGGAAGAGGTTGTGGTAACTCCGGTGAGGGAGAAGTGCGTGGGAAGGAATAACAAAGGAGTGAGTTGGGGACATACTTCTGTGATtgggaggaggaaagagatGGAGGATGCTATCGCTGTTATTCCTGGATTTATGTCCCGCACTTGCGATCACGTTGGCGGTTGCACAGCTCCCGGTTCTAGATCCTCCGGCGAGATCAGTCCTGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCagGTTGCTAAATTTTGTGCCAAGCGAATGCACAGTGTTATAGCAGAGGAGTGGGAGCAGGAAATAGCAGATGGCGCTGAATGGCAGCGAAAGTGGGAAGCTGTATTTGCTAATGGCTTTGAGAGGACGGACAAAGAAATCGAATCAGATGAAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAAATCATTACATCAAACTGTGGCGACTCAAGGGCTGTTCTTTGCCGCAGGACTGAAACAATCCCATTGACTGTGGATCAAAAGCCTGATAGAGAGGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCAATGTCCAGGGCCATAGGTACCATGATTTTATATATTGTCTTTGGTTAA 924 0.4643 MEPLDDSDAQLERVDSDQLTSTSTGSSISSVFSTDDFRYFNSSGDISSISSGSGEISTFTVNRLILAPPLITVSSEADNETAVPEEVVVTPVREKCVGRNNKGVSWGHTSVIGRRKEMEDAIAVIPGFMSRTCDHVGGCTAPGSRSSGEISPVHFFGVYDGHGGSQVAKFCAKRMHSVIAEEWEQEIADGAEWQRKWEAVFANGFERTDKEIESDEVAPEMVGSTASVVVLSGCQIITSNCGDSRAVLCRRTETIPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGTMILYIVFG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00252 307 ProSiteProfiles PPM-type phosphatase domain profile. 105 307 IPR001932 -
Tsu02g00252 307 Pfam Protein phosphatase 2C 113 300 IPR001932 -
Tsu02g00252 307 SUPERFAMILY PP2C-like 98 303 IPR036457 -
Tsu02g00252 307 MobiDBLite consensus disorder prediction 1 27 - -
Tsu02g00252 307 Gene3D - 95 303 IPR036457 -
Tsu02g00252 307 PANTHER ALPHABET, ISOFORM E-RELATED 57 299 - -
Tsu02g00252 307 SMART PP2C_4 94 304 IPR001932 -
Tsu02g00252 307 CDD PP2Cc 107 298 IPR001932 -
Tsu02g00252 307 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
Tsu02g00252 307 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 57 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00252 Tsu-Chr2 2131202 2136327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00252 106 302 PP2C-type Phosphatase Gene Family AT4G26080 55.172 5.42e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00252 K14497 - gmx:100793293 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00252 02 2131202 2136327 Tsu02g00252 02 2131202 2136327 ECH