Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00227 ATGGAACGCATCGTTGGCGGCAACTACAAGCTCGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATCTATCTCGCTACGCATATTGATACCTTTGAAATCGTCGCCATCAAAATCGAGAACACTAAAACAAAGCATCCACAACTACTTTACGAGGCGAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAAGCATAAAATGGTTTGGAGTAGACGGTGAGGATAACGTCCTTGCTATTGATTTATTGGGGCCTAGTCTTGAGGATCTTTTTGTGTATTGTGGGAGGAAGTTTTCGTTGAAGACTGTGTTAATGTTAGCCGATCAAATGATTACTAGAATAGAATATGTGCATTCGAAAGGATATTTACATAGGGATATTAAACCAGATAACTTCCTCATGGGACTTGGTCGGAAGGCCAACCAGGTTTACATAATTGATTTTGGGCTAGCAAAACGGTATCGGGACTCCACAACCCATCGCCACATTCCTTACAGGGAGAACAAAAGCTTAACCGGGACTGCTCGATATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGccTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAACAGAAGTATGATAAAATATGTCAGAAGAAGGTATCAACTCCTATCGAGGTACTATGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCATTCATTGACGTTTGATCAGCGGCCTGATTATGGATTCCTGAAGCGCCTATTTAGAGACCTATTTGCTCGGGAAGGTTAtgcatttgattttgtttttgattggaCCATTTTAAAGTATCAGCAATCACAGAAGCATATAGTGCAGCCTTCCATATCTCCTGTACCTGGTGCAATTAACCGTCATGCAGTCCCGATGGATGTTGACAACCATCAAGGGCTTGGTGAAGAGCGAATTAGATCCGGAAATGCTACTGGTTCTGGTGGTAAAGTTCAGTTTAAATCACCAGCCGGTAGAAACTTGAGTTCTGAAAATCCTCTTGGCAAGAATATTTTTGGTGAAGCAAATATGGCCTCTACTTCGTATTCCCCGGCTGCGCATATCTTCTTCCAAATGAATGTCAAACATGTATTTCAATTTCCAGGCTTGAATAGTATTAAGACCCCCATAAACGTGAAGCTGCAAATGCATGGTGGTTTGCTTGCATATTTCCCTAAGTGTTTGGTCAAGAATATTAAAGTGATGTATTCATGGAGATGGAGACTATGA 1314 0.4117 MERIVGGNYKLGRKIGSGSFGEIYLATHIDTFEIVAIKIENTKTKHPQLLYEAKLYNILQGGSGIPSIKWFGVDGEDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTHRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYAFDFVFDWTILKYQQSQKHIVQPSISPVPGAINRHAVPMDVDNHQGLGEERIRSGNATGSGGKVQFKSPAGRNLSSENPLGKNIFGEANMASTSYSPAAHIFFQMNVKHVFQFPGLNSIKTPINVKLQMHGGLLAYFPKCLVKNIKVMYSWRWRL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00227 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tsu02g00227 437 PANTHER CASEIN KINASE-RELATED 1 377 - -
Tsu02g00227 437 MobiDBLite consensus disorder prediction 335 360 - -
Tsu02g00227 437 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00227 437 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 377 - -
Tsu02g00227 437 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
Tsu02g00227 437 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tsu02g00227 437 MobiDBLite consensus disorder prediction 340 360 - -
Tsu02g00227 437 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00227 437 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00227 437 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Tsu02g00227 437 CDD STKc_CK1_delta_epsilon 9 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00227 Tsu-Chr2 1940809 1943892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00227 7 227 CBL-interacting serine-threonine protein kinases AT4G24400 28.395 6.16e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tsu02g00227 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00227 K08960 - gmx:100779936 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00227 02 1940809 1943892 Tsu03g03414 03 47091199 47094776 PCT