Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00213 ATGGCGACGGAGCGTCAATCCAAGAGTTGGAGCATCCATACCCGATCAGAAATCATCGCTAAGTACAAAATCATGGAACGAATCGGCTCCGGAGCTTACGCCGACGTCTACCGTGGTCGTCGTCTCTCCGACGACCTAACAGTTGCTCTCAAGGAAATCCACGACTACCAATCCGCCTTCCGAGAAATCGAAGCATTGCAAATGCTTCAAGGTTCTCCAAACGTCGTCGTCATGCACGAACACTTCTGGCGCGAAGATGAAGACGCTGTTATCGTTCTTGAATACCTCACCACCGACTTGTCCACCGTCATTTCCAATGCCGCCAAGGAAGGTATTCCACTTCCCGTTGGTGAGATGAAGCGTTGGATGATTCAGATTCTTTCCGGTCTTGATTCCTGTCACCGGAATATGATTGTTCATCGTGATTTGAAGCCTTCTAATCTCTTGATTTCTGAGTCTGGTATTCTCAAATTGGCTGATTTTGGACAGGCAAGGATACTCACAGAGCCTGGATTTGATGCTTATGAGGAGAATCCACCACTGTGTGAGCATGATAATTCTAATCATGAAAGCTCACTTCATCAAGAGCAGGGTAGTAGTCATGAAGAGTATTTTGGTGTTTCAGATGAGCTGAAAACAAAGAGAACTGTGGATGACGTTGATAAGGATACAAACATTCCGGATGGAAATACTTCTTGTCTTGCAACATGCACAGAAAGTGATATGGATAATGATCCTATGAGAACTTCTTTTAGTTATGAAGCAACGGAGGGGGAAGATAGAGAAAGTGGTGGTTTCACGTCATGTGTTGGAACTCGCTGGTTCCGTGCTCCTGAATTGCTTTACGGATCCGTAGACTATGGTTTAGAAATTGATCTCTGGTCACTTGGATGTATTTTTGCTGAGCTCTTGACTCTTAAGCCCTTGTTTCCTGGAACAGCTGATATTGACCAGCTCGGTAGAATTATTAATGTTTTGGGCAACCTTGATGAGAGAGCCTGGTCTGGTTGTTCAAAACTTCCTGATTACGGAATAATCTCGTTTAGCAAGGTAGAAAACCCTGCTGGTGTTGAAGCCTGCCTGCCCAACCGCTCACCCGATGAAGTAtctcttgtcaaaaaactggtTTGTTATGATCCGGCTAGGAGGGCTACAACAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCTGTTTCTGAGTTGCGAGTTCCTTTGACCAGAAATACAGAAGATGGGGATACTGTTGGTGGGTGGCAGGATTACAATGACATGGGTTCTGATTCTGATTTCGATGACTTTGCCCCTGTGAGTTTCACCAAAACTGGTACCGGTTTCTCTATACAATTTCCTTGA 1371 0.4449 MATERQSKSWSIHTRSEIIAKYKIMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVVMHEHFWREDEDAVIVLEYLTTDLSTVISNAAKEGIPLPVGEMKRWMIQILSGLDSCHRNMIVHRDLKPSNLLISESGILKLADFGQARILTEPGFDAYEENPPLCEHDNSNHESSLHQEQGSSHEEYFGVSDELKTKRTVDDVDKDTNIPDGNTSCLATCTESDMDNDPMRTSFSYEATEGEDRESGGFTSCVGTRWFRAPELLYGSVDYGLEIDLWSLGCIFAELLTLKPLFPGTADIDQLGRIINVLGNLDERAWSGCSKLPDYGIISFSKVENPAGVEACLPNRSPDEVSLVKKLVCYDPARRATTTELLHDKYFNEEPLPVPVSELRVPLTRNTEDGDTVGGWQDYNDMGSDSDFDDFAPVSFTKTGTGFSIQFP 456
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00213 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Tsu02g00213 456 PANTHER CYCLIN-DEPENDENT KINASE 10 14 404 - -
Tsu02g00213 456 SUPERFAMILY Protein kinase-like (PK-like) 15 401 IPR011009 -
Tsu02g00213 456 SMART serkin_6 22 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00213 456 Gene3D Transferase(Phosphotransferase) domain 1 108 398 - -
Tsu02g00213 456 Gene3D Phosphorylase Kinase; domain 1 13 107 - -
Tsu02g00213 456 PANTHER CELL DIVISION PROTEIN KINASE 14 404 - -
Tsu02g00213 456 ProSiteProfiles Protein kinase domain profile. 22 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00213 456 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tsu02g00213 456 Pfam Protein kinase domain 22 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00213 456 Pfam Protein kinase domain 263 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu02g00213 Tsu-Chr2 1851549 1854179 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00213 4 456 Core Cell Cycle Gene Families AT4G28980 61.216 0.0 586
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Tsu02g00213 Pkinase 1.8e-32 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00213 - - mtr:MTR_8g103240 820.461
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00213 02 1851549 1854179 Tsu02g00213 02 1851549 1854179 ECH
Tsu02g00213 02 1851549 1854179 Tsu03g03377 03 46560140 46562946 PCT