Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g00213 | ATGGCGACGGAGCGTCAATCCAAGAGTTGGAGCATCCATACCCGATCAGAAATCATCGCTAAGTACAAAATCATGGAACGAATCGGCTCCGGAGCTTACGCCGACGTCTACCGTGGTCGTCGTCTCTCCGACGACCTAACAGTTGCTCTCAAGGAAATCCACGACTACCAATCCGCCTTCCGAGAAATCGAAGCATTGCAAATGCTTCAAGGTTCTCCAAACGTCGTCGTCATGCACGAACACTTCTGGCGCGAAGATGAAGACGCTGTTATCGTTCTTGAATACCTCACCACCGACTTGTCCACCGTCATTTCCAATGCCGCCAAGGAAGGTATTCCACTTCCCGTTGGTGAGATGAAGCGTTGGATGATTCAGATTCTTTCCGGTCTTGATTCCTGTCACCGGAATATGATTGTTCATCGTGATTTGAAGCCTTCTAATCTCTTGATTTCTGAGTCTGGTATTCTCAAATTGGCTGATTTTGGACAGGCAAGGATACTCACAGAGCCTGGATTTGATGCTTATGAGGAGAATCCACCACTGTGTGAGCATGATAATTCTAATCATGAAAGCTCACTTCATCAAGAGCAGGGTAGTAGTCATGAAGAGTATTTTGGTGTTTCAGATGAGCTGAAAACAAAGAGAACTGTGGATGACGTTGATAAGGATACAAACATTCCGGATGGAAATACTTCTTGTCTTGCAACATGCACAGAAAGTGATATGGATAATGATCCTATGAGAACTTCTTTTAGTTATGAAGCAACGGAGGGGGAAGATAGAGAAAGTGGTGGTTTCACGTCATGTGTTGGAACTCGCTGGTTCCGTGCTCCTGAATTGCTTTACGGATCCGTAGACTATGGTTTAGAAATTGATCTCTGGTCACTTGGATGTATTTTTGCTGAGCTCTTGACTCTTAAGCCCTTGTTTCCTGGAACAGCTGATATTGACCAGCTCGGTAGAATTATTAATGTTTTGGGCAACCTTGATGAGAGAGCCTGGTCTGGTTGTTCAAAACTTCCTGATTACGGAATAATCTCGTTTAGCAAGGTAGAAAACCCTGCTGGTGTTGAAGCCTGCCTGCCCAACCGCTCACCCGATGAAGTAtctcttgtcaaaaaactggtTTGTTATGATCCGGCTAGGAGGGCTACAACAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCTGTTTCTGAGTTGCGAGTTCCTTTGACCAGAAATACAGAAGATGGGGATACTGTTGGTGGGTGGCAGGATTACAATGACATGGGTTCTGATTCTGATTTCGATGACTTTGCCCCTGTGAGTTTCACCAAAACTGGTACCGGTTTCTCTATACAATTTCCTTGA | 1371 | 0.4449 | MATERQSKSWSIHTRSEIIAKYKIMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVVMHEHFWREDEDAVIVLEYLTTDLSTVISNAAKEGIPLPVGEMKRWMIQILSGLDSCHRNMIVHRDLKPSNLLISESGILKLADFGQARILTEPGFDAYEENPPLCEHDNSNHESSLHQEQGSSHEEYFGVSDELKTKRTVDDVDKDTNIPDGNTSCLATCTESDMDNDPMRTSFSYEATEGEDRESGGFTSCVGTRWFRAPELLYGSVDYGLEIDLWSLGCIFAELLTLKPLFPGTADIDQLGRIINVLGNLDERAWSGCSKLPDYGIISFSKVENPAGVEACLPNRSPDEVSLVKKLVCYDPARRATTTELLHDKYFNEEPLPVPVSELRVPLTRNTEDGDTVGGWQDYNDMGSDSDFDDFAPVSFTKTGTGFSIQFP | 456 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g00213 | 456 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 138 | 150 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu02g00213 | 456 | PANTHER | CYCLIN-DEPENDENT KINASE 10 | 14 | 404 | - | - | |
Tsu02g00213 | 456 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 401 | IPR011009 | - | |
Tsu02g00213 | 456 | SMART | serkin_6 | 22 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00213 | 456 | Gene3D | Transferase(Phosphotransferase) domain 1 | 108 | 398 | - | - | |
Tsu02g00213 | 456 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 107 | - | - | |
Tsu02g00213 | 456 | PANTHER | CELL DIVISION PROTEIN KINASE | 14 | 404 | - | - | |
Tsu02g00213 | 456 | ProSiteProfiles | Protein kinase domain profile. | 22 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00213 | 456 | ProSitePatterns | Protein kinases ATP-binding region signature. | 28 | 51 | IPR017441 | GO:0005524 | |
Tsu02g00213 | 456 | Pfam | Protein kinase domain | 22 | 170 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g00213 | 456 | Pfam | Protein kinase domain | 263 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g00213 | Tsu-Chr2 | 1851549 | 1854179 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g00213 | 4 | 456 | Core Cell Cycle Gene Families | AT4G28980 | 61.216 | 0.0 | 586 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CCRK | Tsu02g00213 | Pkinase | 1.8e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g00213 | - | - | mtr:MTR_8g103240 | 820.461 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g00213 | 02 | 1851549 | 1854179 | Tsu02g00213 | 02 | 1851549 | 1854179 | ECH | |
Tsu02g00213 | 02 | 1851549 | 1854179 | Tsu03g03377 | 03 | 46560140 | 46562946 | PCT |