Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00212 ATGGGTGAAGGTGAGACTAGTGATATTACTCCTAAAAACGCACCATTGGATTCAGTTACAAATTCTACCTCGAAGAAGCTTGCTAGGCAGCTAGATTTCAACGCTTTTGGTGGTGCGCCGGTAACTGCACCTTTGCCGGAACAGTCGCAACCGCCGCCAACACTGCCTCCTCTTCCTGCAGCCAAGTTGGGGAAACCAGAAtctccaaaatcaaaatcaagatctaattttgaaacaaaagatGCTACTCCAAAGAAGCAAAAACAGTGCAACTGTAAACACTCAAGATGCTTAAAGCTGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGCAATTGTGTAAATTGTTTTAACAATGTTGACAATGAAGCGGCTAGACGAGAAGCTGTTGAAGCAACTTTAGAACGCAATCCAAATGCATTTAGGCCGAAAATAGCGAGTAGCCCTCATGGAGCACGTGATAGTAGGGAGGAGGCTGGGGATGTTTTAATATTGGCAAAGCACAATAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAAGGAAGTGAAGAGCGGCAGGCTCTGTTCCATGGagatcaaaacaacaatatgGCATATATTCAGCAGGCAGCCAATGCTGCCATCACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCAGTATcgagaaaaagaaaagtttcGGAACTCTGGCCGTCCATCAAGGATCCATCTGTTAGCAAGCTGGGACAGCAGGCAAATCCTATCAGAGGTCCTGCAGCACCCTCCTCATCCCTGTCTCCTGCCCCAGTTGCTCGTGTTGGACCTGCAACATTAGGCCCTTCAAAATTTATGTACAGGTCGCTTTTAGCAGACATCATACAACCGCAGCACCTGAAGGAGCTTTGCTCTGTTCTTGTGCTAGTATCCGGACAAGCCACCAAAACACTTGCAGACCAGAAAATTTTAAAGGATAAGCACACAGAAGATCAGGCAGAAACTTCTCTTGCTTCTTCAAATCAAGAGCAATTACCAAATCAAAAGGAAGCTGATGTTGAGAAAGCTAATGCTGATGATTGTTCGAGTGCAAACCAAACTGATAAAACTAGTCCTGAAAATTCCAGTTCAGATGGTGCCGATGTTCCAAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGATGAGCAAGATACAATGTTCATGACTGCTGCTCCCTCTATTGGATCAATGGCCCATGCTTGTAACACATCTTCGCAATTGCCTTATGGACAAGGAGCGACAGAGATCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTCAGAGATTTTCTTAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCAAGAAGTGAATTAGAGATTCAAAAGGACCCGATCATCAATAGCACTGAACATGCCAGTACTGAGGCAGCACATCAACAGGGACTGAGAGCCACCAGTAATGGTGTTGCCAATGCTATTGGTAACACCACCACTTCAACATCTTTGGTCCCTAGTAGTGTTGCCAATGTTGTTGGCAACACCACCACTTCAACATCTTTGGTCCCTAGTAGTGTTGCCAATGTTGTTGGCAACACCATCACTTCAACATCTTTGGTCCCTAGTAGTCTTGTTTCGGAAAATGGGGAAATTAAGCCAAAGGTCGAACAATAG 1776 0.4223 MGEGETSDITPKNAPLDSVTNSTSKKLARQLDFNAFGGAPVTAPLPEQSQPPPTLPPLPAAKLGKPESPKSKSRSNFETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPHGARDSREEAGDVLILAKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSRKRKVSELWPSIKDPSVSKLGQQANPIRGPAAPSSSLSPAPVARVGPATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQATKTLADQKILKDKHTEDQAETSLASSNQEQLPNQKEADVEKANADDCSSANQTDKTSPENSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAAPSIGSMAHACNTSSQLPYGQGATEIYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELEIQKDPIINSTEHASTEAAHQQGLRATSNGVANAIGNTTTSTSLVPSSVANVVGNTTTSTSLVPSSVANVVGNTITSTSLVPSSLVSENGEIKPKVEQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00212 591 ProSiteProfiles CRC domain profile. 86 210 IPR005172 -
Tsu02g00212 591 PANTHER TESMIN/TSO1-RELATED 57 530 IPR028307 -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 45 63 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 381 400 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 268 293 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 268 284 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 347 415 - -
Tsu02g00212 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 57 530 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g00212 591 MobiDBLite consensus disorder prediction 37 80 - -
Tsu02g00212 591 SMART CXC_2 85 125 IPR033467 -
Tsu02g00212 591 SMART CXC_2 170 211 IPR033467 -
Tsu02g00212 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 173 207 IPR005172 -
Tsu02g00212 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 87 122 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00212 Tsu-Chr2 1839237 1845827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00212 66 494 CPP Transcription Factor Family AT4G29000 64.286 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tsu02g00212 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00212 - - gmx:100777698 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00212 02 1839237 1845827 Tsu02g00212 02 1839237 1845827 ECH