Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00206 ATGGACAATGGCATGTCATCTTCATTCACAACAGCCACAGTACAGGAAGACAACGACATCCCAGacATGGGCACTTGCACTAATGTCAATTCCAATATGGAAAATGAATTGGGGCTAAATTGTGATGCCGAATTGAAGCCTAAGGTTGGGCAACTATTTAATTCATTAGAAGAAGgtgaacaattttacaaaaaatatgcACATAGTGTCGGGTTTAGTGTGCGTGCATCATCCGAAACTAAAGATAAAAATGGCGTGAAGCGATGGAAGCATTTTGTTTGCTCAAAAGAAGGTTATTTGCCAAATAAGACAAAAGATAAAGAGCATAGTGAATCTACTGTCAAGACTAGGAGAAGGAGTCTAACAAGAGAAGGGTGCAATGCAAAAGCTGTTTTCAAATGGGTGAAAGAAGGTAAATATGAGCTAGCTCGATTTCATGAAAGCCATACACATGCACTTGCTTCTCCTATGAAGAGACCGTTTCTAAGATCGGCAAGAAAAGTGAATCCAATTCACAAGAATTTATTTCATGCATATGGTAAAGCAAATATTGGAACTTGTAAGACTTTCCGCTTATTGAAAGAACAATTTGGTGGTTATGAAAATGTTGGGTGCACGCAGAGAGATCTTCAAAATTATTCAAGAGATGTGAGGAATTTGATTAAGGACTCTGATGcccatttttttattgataactttagGAGGAAGCAAGAAATTAGTCCATCATTCTATTATGCATATGAGGTAAGTGAAGAAGGTAGACTAAAACATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCCTTGTTTGGGGATGTGGTTTCATTTGATACTACATATCGAACAAATCAATATTCTATGATTTTTGCACCTTTCACCGGGATAAACCATCATAGACAATCTATAACTTTTGGAGCAGGATTTttagaaaatgagaaaattgaGTCATTTGTGTGGTTGTTTGAAAAGTTTCTGGAAGCAATGGGAGGACATGAACCAACTCTTATAATAACTGATCAAGATCCTTCCATGAAAGTtgctatagaaaaaaaatttactactTGTGTTCATCGATTTTGCATGTGGCACATAATGAAAAAAGTTTCTGAAAAAATAGGTGGTTCTGTGAATGGTAATGATGAGTTCAACAAAAGTTTCAAGTCATGTGTTTGGGGATCAGAGACACCAGAAGAGTTTGAAGAAACATGGAAGTCTATAATAACTAGGTTTGAGTTAGAGAAAAATGAATGGTTGTCACATATGTTTAGTATTCGAAGGATGTGGATCCCTGCATACTTTAAAGACGTTTTTTTGGCTGGGATATTGAGAACAACATCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAATTTCTTGAGTCCTAATGTTACCTTGGTTGATTTTTGGATGAGGTTTGATTCGGCAATAGAAGCGCAAAGGCATAATGAGTTGCTTGCCGATAATAATTCAATTCATTCTACACCAAAACTAATGTTGGATCGTGGCATAGAGAGGCATGCAAGAGATGTGTATACTCGCGAGaacttttatatatttcagCAAGAATTATGGACAGCATGTGTAGATTGTGGGattgaatataagaaagaggAAAATGGAATGGAAATATTTCATATAAATGATAATAGTGATGTCAATGAATTTCAAAGTTTCTACAACTTGGCTGTATCAGCACAAAACAGAAAGCAACACATCAAAACAATACAAAACCAAACCAACCACTTAGGAACCAAAACAACCATTTGCAGAGCCAATACACCTGGACTCTAA 1797 0.3411 MDNGMSSSFTTATVQEDNDIPDMGTCTNVNSNMENELGLNCDAELKPKVGQLFNSLEEGEQFYKKYAHSVGFSVRASSETKDKNGVKRWKHFVCSKEGYLPNKTKDKEHSESTVKTRRRSLTREGCNAKAVFKWVKEGKYELARFHESHTHALASPMKRPFLRSARKVNPIHKNLFHAYGKANIGTCKTFRLLKEQFGGYENVGCTQRDLQNYSRDVRNLIKDSDAHFFIDNFRRKQEISPSFYYAYEVSEEGRLKHVFWADGICRKNYSLFGDVVSFDTTYRTNQYSMIFAPFTGINHHRQSITFGAGFLENEKIESFVWLFEKFLEAMGGHEPTLIITDQDPSMKVAIEKKFTTCVHRFCMWHIMKKVSEKIGGSVNGNDEFNKSFKSCVWGSETPEEFEETWKSIITRFELEKNEWLSHMFSIRRMWIPAYFKDVFLAGILRTTSRSESENSFYGNFLSPNVTLVDFWMRFDSAIEAQRHNELLADNNSIHSTPKLMLDRGIERHARDVYTRENFYIFQQELWTACVDCGIEYKKEENGMEIFHINDNSDVNEFQSFYNLAVSAQNRKQHIKTIQNQTNHLGTKTTICRANTPGL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00206 598 Pfam MULE transposase domain 275 369 IPR018289 -
Tsu02g00206 598 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g00206 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 218 559 IPR031052 GO:0006355
Tsu02g00206 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 170 IPR031052 GO:0006355
Tsu02g00206 598 Pfam FAR1 DNA-binding domain 61 154 IPR004330 -
Tsu02g00206 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 218 559 - -
Tsu02g00206 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 40 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00206 Tsu-Chr2 1795930 1799306 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g00206 MULE 4.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00206 - - soe:110798711 614.379