Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00191 ATGAAGAAAACCCAAACACAAACACTCCTTATTGTTACACTGTTTCTAACCATCACAAACACACTCTCCCTTTCAGCTCTCACAATCAGTGACCCATCTTTTGTCTTCGAAAACAACCGTATCAGAGACGCTTACACAGCATTACAATCTTTCAAACAATCCATTCTCTCTGATCCATTCAATTTCACAACAAACTGGGTTGGATCCAATGTATGCAACTACACCGGCATTTACTGTGCTCAAGCATTAGACAACCCTAAAATACGCACAGTCGCCGGTATCGATCTCAATCATGCCGACATTGCCGGTTATTTACCTGATGAGCTTGGTCTCTTAGTAGATCTCGCACTTTTCCATATAAACTCTAACAGATTCTGTGGCACTGTACCACACACTTTCAACAAACTGAAACTTCTCTTCGAATTGGATCTCAGTAATAACAGATTCGCGGGGAAGTTTCCAGAAGTTGTATTAAACCTTCCTGTTCTCAAATTCTTGGATATAAGGTTCAATGAATTCGAAGGTACGGTTCCAAAAGCGCTTTTTGATAAAGACTTAGACGCGATTTTCATAAACGACAACCGTTTTGCGTTTGAGTTACCTGATAATTTTGGTAACTCACCTGTTTCCGTTGTCGTTTTAGCAAACAACAAATTCCAAGGGTGTATTCCTTCAAGTTTAGGGAACATGTCTAATTTAAACgaaatcaattttttgaataatttgttTAAGTCATGTTTACCTCCTGAGATTGGATTGTTGAAGAATCTCACAGTTTTCGATGTGAGTTTTAATCAGTTGGTTGGTTCGTTACCGTCTGCTATTGGCGGTGCGAAGAGTTTGGAGCAGCTTAATGTGGCGCATAATTTGTTTTCTGGTAAAATTCCGGCGAGTATTTGTATGTTGCCTAATCTTAAGAACTTTACGTTTTCTGATAATTTCTTTACTGGTGAACCTCCGGCGTGTGTTGCTTTGCCGGCGGTTGATGATAAGAGAAATTGTTTGCCGGGGAGGCCGTTACAGAGATCTCCTGGAGAATGTGTGCCGGGTTTGTTTAAACCGGTCGATTGTAAGTCGTTTAAGTGTAAACCGTTTAATCCTTCCTTGCCTTCACCGTCACCGGTAGTGTCGCCTATCACTCCACAACCGCCGGCAGTGTCGCCTTCTCTTCCGCCACCGGTAACAATAACACCTATCCCTCCATCACCGCCGGCTGTATCACCTTCTCTTCCGCCACCGGTAACAATAACACCTATCTCTCCATCACCGCCGGCAGTTGTACCTTCTCCACCACCGTCAACACCTATCACTCCATCACCGCCGTCAACAGGGACACCTATCACTCCAGCACCACCAGTAGTGTCACCTTCATCTCCACCACCAACGCACTCTCCTCCACATGTGCATTCACCACCTCCATCTCCAACAACTCCTGTGGTGTCACCACCGTCACATACTACTCCAGTGCCGCCATCTCCGCCACTAAATTCACCACCATCTCCTGATCCTCATTATGGTTCATCGCCTCCTCCATCTCATTCACCACCATCATTTCCCCCACATTCCCCTGTTTTTTCACCACCACCGCCAGTAACAACACCTTCCACTCCACCAACACCGGTTGTGCCACCTTTCTTTCCACCACCAACTCACTCTTCTCCGCCAGTGTTTTTACCACCACCACCCCCTCATTATGGCCATTTGCCGCCTCCACCTCCATCACCCCCTCATTCCCCTATTCATTTACCACCACAAACACCACCATATCAATCTCCACCGCCTTCTGTAGGACCTCATCCGtcaccatcaccaccaccttGTGAAGAGCATCCAGCCCCACCACCACCGCCATTATATGTTTCTCCACATCCACCATTTCAATATACTCCTCCATCACCACCACATCCTTCCCCTGTGCATTACAGTtccccaccaccaccaccaccagccCCTGCATATGGAGGGCCATTGCCACCAATTGTTGGACTCCCATACGCATCGCCTCCACCACCACCTTTCTATTGA 2025 0.4489 MKKTQTQTLLIVTLFLTITNTLSLSALTISDPSFVFENNRIRDAYTALQSFKQSILSDPFNFTTNWVGSNVCNYTGIYCAQALDNPKIRTVAGIDLNHADIAGYLPDELGLLVDLALFHINSNRFCGTVPHTFNKLKLLFELDLSNNRFAGKFPEVVLNLPVLKFLDIRFNEFEGTVPKALFDKDLDAIFINDNRFAFELPDNFGNSPVSVVVLANNKFQGCIPSSLGNMSNLNEINFLNNLFKSCLPPEIGLLKNLTVFDVSFNQLVGSLPSAIGGAKSLEQLNVAHNLFSGKIPASICMLPNLKNFTFSDNFFTGEPPACVALPAVDDKRNCLPGRPLQRSPGECVPGLFKPVDCKSFKCKPFNPSLPSPSPVVSPITPQPPAVSPSLPPPVTITPIPPSPPAVSPSLPPPVTITPISPSPPAVVPSPPPSTPITPSPPSTGTPITPAPPVVSPSSPPPTHSPPHVHSPPPSPTTPVVSPPSHTTPVPPSPPLNSPPSPDPHYGSSPPPSHSPPSFPPHSPVFSPPPPVTTPSTPPTPVVPPFFPPPTHSSPPVFLPPPPPHYGHLPPPPPSPPHSPIHLPPQTPPYQSPPPSVGPHPSPSPPPCEEHPAPPPPPLYVSPHPPFQYTPPSPPHPSPVHYSSPPPPPPAPAYGGPLPPIVGLPYASPPPPPFY 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00191 674 Gene3D Ribonuclease Inhibitor 43 333 IPR032675 -
Tsu02g00191 674 Pfam Leucine rich repeat N-terminal domain 45 79 IPR013210 -
Tsu02g00191 674 PANTHER LRR EXTENSIN-LIKE PROTEIN 3 672 - -
Tsu02g00191 674 PRINTS Proline rich extensin signature 431 456 - -
Tsu02g00191 674 PRINTS Proline rich extensin signature 411 428 - -
Tsu02g00191 674 PRINTS Proline rich extensin signature 363 384 - -
Tsu02g00191 674 PRINTS Proline rich extensin signature 387 403 - -
Tsu02g00191 674 SUPERFAMILY L domain-like 43 326 - -
Tsu02g00191 674 MobiDBLite consensus disorder prediction 369 674 - -
Tsu02g00191 674 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00191 Tsu-Chr2 1638644 1641883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00191 31 362 Trihelix Transcription Factor Family AT4G18670 75.522 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00191 - - cam:101504763 612.453