Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00175 ATGTTGGGTACCCTCCCACACAGAACCCTCCAAGCCTTATCCAAAAAATACGGACCAATGATGTCAATACGGTTAGGACAAGTCCCAACAATCATTGTCTCTTCATCTTCAGCTGCAGAACAATTCCTCAAAACAAACGACATTGTTTTCTCAAGCCGTCCAAAACTTGAAGCTACTCATTACCTCTCTTATGGTTCTAAAGGTTTGGTTTTCACTGAATACGGTGCTTATTGGCGTAACGTCAGAAAAATTTGTACTCTGCAGCTTTTAAGTGCTTCTAAAGTTGAGTCGTTTGCGCCTTTGAGGAAAAGGGAAACGGAATTGGCTATGAAGTTGGTGAAGAAAGCTGCTAGTTTGTGTGAGGTTTTTGATGTGAGTGAGTTTGTTCATAATGTGATTGTGGATATTGTTTATAAAATGGTGTTGGGGTGTAGTGTTGATGAGGAGTTTGATTTGAAAGGACAACTTCAATTGGGGATGGAACTTTCTGGTGCTTTTAATCTTGCTGATTATGTTCCTTTTCTTGGAGTTTTTGATCTTCAGGGATTAAAAAGAAGGTACAAGAGTACTAGTAAAGCAATGGACCAAGTGATGGAGAAGATAATTAACGAACATGAACAACGTTCACATATACAAAAtgaagagaagaaacataaggACTTCGTAGACATTCTACTATCACTGATGCACCAACCGATCAACCCCTCTGATGAACAAAACCATGTCATTGATCGAACAAACATAAAGGCTATACTATTAGACATGATCGCCGGTGCATTTGAAACTTCTGCAACCATTGCGGAGTGGGCTTTATCCGAGCTCATAAGACATCCAAGAGTGATGAAAAATCTCCAACAAGAGCTAGATAACGTGGTCGGGGTGGATAAATTAGTGGAGGAGAATGATTTGACAAAGTTAAGTTACTTGGATATTGTGATCATGGAGACCTTAAGATTATATCCTGCAGGACCACTTGTGCCCCGCGAGTCAACAGAGGACGCTACGGTTCATGGTTATTTCgtaccaaaaaaatcaagagTAATTTTGAATTTATGGGCAATAGGAAGAGATTCAGATGCATGGTCTAGTAACGCTGAAAATTTTTATCCAGAGAGATTCATAGATAAAAATTTAGACTACCGTGGAcatgattttcaatttatacCATTTGGTTATGGTCGAAGAGGATGTCCTGGTCTGCACTTGGGACTAGTTACGGTTAAACTTATTGTGGCTCAATTGGTACATTGCTTTTCGTGGGAACTTCCCTCGAATATGACTCCAAATGATTTGGACATGACCGAAAAATTTGGTCTCTCAATCCCAAGAGCCAAACACTTGCTTGCGGTGCCAACATACCGTCTTTCTGAGGAAGCAACATGA 1383 0.3876 MLGTLPHRTLQALSKKYGPMMSIRLGQVPTIIVSSSSAAEQFLKTNDIVFSSRPKLEATHYLSYGSKGLVFTEYGAYWRNVRKICTLQLLSASKVESFAPLRKRETELAMKLVKKAASLCEVFDVSEFVHNVIVDIVYKMVLGCSVDEEFDLKGQLQLGMELSGAFNLADYVPFLGVFDLQGLKRRYKSTSKAMDQVMEKIINEHEQRSHIQNEEKKHKDFVDILLSLMHQPINPSDEQNHVIDRTNIKAILLDMIAGAFETSATIAEWALSELIRHPRVMKNLQQELDNVVGVDKLVEENDLTKLSYLDIVIMETLRLYPAGPLVPRESTEDATVHGYFVPKKSRVILNLWAIGRDSDAWSSNAENFYPERFIDKNLDYRGHDFQFIPFGYGRRGCPGLHLGLVTVKLIVAQLVHCFSWELPSNMTPNDLDMTEKFGLSIPRAKHLLAVPTYRLSEEAT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00175 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Tsu02g00175 460 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 455 - -
Tsu02g00175 460 Pfam Cytochrome P450 6 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 Gene3D Cytochrome P450 2 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 Coils Coil 180 200 - -
Tsu02g00175 460 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 351 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 38 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PRINTS E-class P450 group I signature 14 33 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00175 460 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 455 - -
Tsu02g00175 460 SUPERFAMILY Cytochrome P450 3 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00175 Tsu-Chr2 1338004 1340106 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00175 1 455 Monolignol Biosynthesis Gene Families AT4G36220 39.066 6.65e-120 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00175 - - gmx:100814172 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00175 02 1338004 1340106 Tsu03g03230 03 44598034 44600559 PCT