Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00173 ATGGCGCCATATCTACTTGCACTATTCACCACCATCTGTGTCGTCTCTGCTGCAACCGGGAACAAAGACCACTTTGTAGGCGGCACAGCCGGATGGTTTTTCAACTCCACCACCAACACTTCCGCCACAAATTACTCTTCATGGGCTTCCACTCAAACTTTCAACCTTGGCGATTATCTCAtttttaacaCGAATTCGAACCAAAGCGTGATTCTTACATACAACAGAACCGCTTACTTGAACTGCACCGCCAATGATTCAGACAACGAAACAACAGTATACAGCAGTGGTGGACCTGATGGTTTCAGCACACCACTTACTATTTCCGTTCCACTGACTATTGCGGGACCGAACTACTTCTTCTCCGATTATAGCGACGGTGTTCAGTGTCAACATGGATTGGCATTTCAGATCCAAGTCCAGCGTGGCATTGGCTTGCCGCCGAGCCTCAACCagcctcctcctcctcctcctcagACACCTAATAGTGGCGTGTTCTCGAGATGTGTGGCAGTTTACGGACTCAGTGTGGCACTGATATTGTTGCAATTGCAATTTTGGTAA 564 0.4521 MAPYLLALFTTICVVSAATGNKDHFVGGTAGWFFNSTTNTSATNYSSWASTQTFNLGDYLIFNTNSNQSVILTYNRTAYLNCTANDSDNETTVYSSGGPDGFSTPLTISVPLTIAGPNYFFSDYSDGVQCQHGLAFQIQVQRGIGLPPSLNQPPPPPPQTPNSGVFSRCVAVYGLSVALILLQLQFW 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00173 187 PANTHER BLUE COPPER PROTEIN 15 157 IPR039391 GO:0009055
Tsu02g00173 187 PANTHER OS12G0454600 PROTEIN 15 157 - -
Tsu02g00173 187 SUPERFAMILY Cupredoxins 22 141 IPR008972 -
Tsu02g00173 187 Gene3D - 20 142 IPR008972 -
Tsu02g00173 187 Pfam Plastocyanin-like domain 40 133 IPR003245 GO:0009055
Tsu02g00173 187 ProSiteProfiles Phytocyanin domain profile. 22 142 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00173 Tsu-Chr2 1333603 1334326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00173 5 164 Phytocyanin Superfamily AT1G08500 39.394 9.46e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00173 - - gmx:100783106 202.216