Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00167 ATGAATTCCCCTCCATCTGATATCATTATTCTACCTAGAGAATTGGGTAGTTCGGATGACATTTTCGATGGATTTGAAAGAAGAAACGGACATTTAGTAAACGCTCATGGTGAGGTGGAAGCTAAACATCGATCGGTTTTGGTTGAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGCCAAATGTAACAGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGTCAGATACTAAACAAACTACGGCCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACTTTTCTCAGAACTTTGGATGCAATGGGGTTGCCGCGATTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGAATTGTCTTTTAATACTCAGAGCGAAAACTTTAACTAATTCTTTGGGAGATGCTGTTTCTGCACCTAATTCCAATGCATCAAGCCCTCGAGGGTTTTCAGCTTCGAGTTTTCATTATTCGCCACCTAGTGTGGATCAGAGGAAGGTTTCAACTGAGTCGAGGTTTCAAGGTTTTATGAGTAACCCTCTTATGGCGGAATCATCAGCTTCATTAATACACCAAGTTGGTCATAAATTCCACGAGGTTTTTCAAATTAAACCTGGTAGCTATGCAGATCTTCCTGCGTCAAAAATATCAGAAATGATGAAATCAAACAGTTTAGATAACGCTCCCACACAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTcgaaaaaagaaatggagaaaTACCTCATcgGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGACGCATATCGACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAGGCTCGGGAAGAAAAATATCAATCGAGAATAAGAGTACTCGAGGCACTTGCATCAGAAACTAGAGAAGAGAATGagAGCGAAGTTTGGCAACAGATGTTTACTAGTCAGCTTGAACAGTTGAAGGTCACAGACGtagaaaagaaggaaaatgaaaaagaagttaTTAGGTTGACGAAACTGCTAGAGgaaaaaaatgtagaaatttCCGAATTGACGCAAAAACTAGAAGAAATCAAAAAACAATATGAAGCACAATGCTCACAGTTGGAAGAAGAAGCTAGGGATGCTAAAGAAGAATTGAGACAGAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAGGAGCGAGGCTAAGGATATTGAGGCTTCTTCGAATTCAAAATATCACGAGTGGAACATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCCCTACAGAAATTTAAATTGTCGTGGGAATCCATTAAGCAAGATGTTATGAAAGGGAGAACAGTTTATGCAGAAGAGTGTAATCGATTAAGCTTAAATCTAAAACCACTCATACATGCATCTCAGAACTATCAAGCTGTCGTTggtgaaaatagaaaattgtttAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATATTGTCGAATTAGACCGTGCCTCTTAAGCAAAAAGGAAAAACAGTCCATTGTAGAAGACATCGGTGAAAGTGATTTGGTTGTGGCGAATCCCTCCAAAGAAGGGAAAGATGTGCATCGATCATTTAAGTTCAACAAGATTTTTGGTCCTACCGCAACTCAagGAGACGTATACGCCGACATTCATCCTTTTGTAAGATCAGTACTTGATGGATACAATGTATGTATGTTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCACGATTTCCACAAGTAGAGCAAACTTCACAGAATATGAGATTTGGGTCCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTGTCAACCGAGGGTTCTCCAAAAAgACTTGGGATATTGACTCAATTGCAAGCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTCCAGATGTCATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAACGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTACTACTCTGCATGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACGGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTGCTGCCCTCGGAGATGTCATTTTTGCCCTTTCACAAAAGAGCTCACATATACCATATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGCGGTCAAGCAAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAATTGAATTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATCGAACAGGTGAATTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGCGCGTCAGTCGGTGGTATTTCTAAGCAAATCCATAAACTACCAAGTATAAGTTATAAGCACCCTGTTGAAGGTGATATCCAACAAGCAATGGATGATCATACACCGAAAAATGAACTTCTACGTTCATTTGGAAATTCTAAGCGAGAAACTCGAGGAATTTCAGATGCAAATTCTCAAGAAAAATCAAGTGACTTTTCTGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATCACGGCGAGTGAAGCTAAAAAATCTTCAACTAAGACGTCAAAGCCTAGTGCACTATCCAAAACAGTTCAAGCGGTAAGGAAATTAGGCCGAATCTCATCTACCACGTCTTTATCAAAAACAAAGGAACCCTCGAAGGAATCCTCGAAGAAACCATCAGGTATTGCGAAAAGCACCAGTATTGACCAACTTAAACCTACAAAATCAAAACGGTGGCTTTAG 3123 0.3865 MNSPPSDIIILPRELGSSDDIFDGFERRNGHLVNAHGEVEAKHRSVLVEWLNNLLPSLDFSPNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLDAMGLPRFEISDLEKGSMKPVVNCLLILRAKTLTNSLGDAVSAPNSNASSPRGFSASSFHYSPPSVDQRKVSTESRFQGFMSNPLMAESSASLIHQVGHKFHEVFQIKPGSYADLPASKISEMMKSNSLDNAPTQSLLSVVNGILEESVEKRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALASETREENESEVWQQMFTSQLEQLKVTDVEKKENEKEVIRLTKLLEEKNVEISELTQKLEEIKKQYEAQCSQLEEEARDAKEELRQKSHEYEHRLEELRSEAKDIEASSNSKYHEWNMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVMKGRTVYAEECNRLSLNLKPLIHASQNYQAVVGENRKLFNEVQELKGNIRVYCRIRPCLLSKKEKQSIVEDIGESDLVVANPSKEGKDVHRSFKFNKIFGPTATQGDVYADIHPFVRSVLDGYNVCMFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFTISTSRANFTEYEIWVQMVEIYNEQVRDLLSTEGSPKRLGILTQLQANGIAVPEASMYPVKSPPDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGTTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLAALGDVIFALSQKSSHIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSIELGAARNNKEARELIEQVNSMKNTILKKDEEIERLKSLSASVGGISKQIHKLPSISYKHPVEGDIQQAMDDHTPKNELLRSFGNSKRETRGISDANSQEKSSDFSDNNSIALGTETDGSSDNSITASEAKKSSTKTSKPSALSKTVQAVRKLGRISSTTSLSKTKEPSKESSKKPSGIAKSTSIDQLKPTKSKRWL 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00167 1040 Coils Coil 848 882 - -
Tsu02g00167 1040 Pfam Calponin homology (CH) domain 43 143 IPR001715 GO:0005515
Tsu02g00167 1040 SMART ch_5 43 143 IPR001715 GO:0005515
Tsu02g00167 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 879 IPR027417 -
Tsu02g00167 1040 SUPERFAMILY Calponin-homology domain, CH-domain 40 160 IPR036872 -
Tsu02g00167 1040 Gene3D Kinesin motor domain 458 846 IPR036961 -
Tsu02g00167 1040 PRINTS Kinesin heavy chain signature 591 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 PRINTS Kinesin heavy chain signature 714 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 PRINTS Kinesin heavy chain signature 794 815 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 PRINTS Kinesin heavy chain signature 745 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 ProSiteProfiles Kinesin motor domain profile. 517 844 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 PANTHER KINESIN-LIKE PROTEIN KLP-3 364 1036 - -
Tsu02g00167 1040 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 350 - -
Tsu02g00167 1040 Gene3D - 354 395 - -
Tsu02g00167 1040 ProSiteProfiles Calponin homology (CH) domain profile. 41 148 IPR001715 GO:0005515
Tsu02g00167 1040 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 364 1036 - -
Tsu02g00167 1040 MobiDBLite consensus disorder prediction 920 1040 - -
Tsu02g00167 1040 CDD CH 47 146 IPR001715 GO:0005515
Tsu02g00167 1040 Pfam Kinesin motor domain 523 844 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 3 350 - -
Tsu02g00167 1040 MobiDBLite consensus disorder prediction 930 1009 - -
Tsu02g00167 1040 Coils Coil 352 429 - -
Tsu02g00167 1040 Gene3D - 33 149 IPR036872 -
Tsu02g00167 1040 MobiDBLite consensus disorder prediction 1018 1033 - -
Tsu02g00167 1040 SMART kinesin_4 515 852 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g00167 1040 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00167 Tsu-Chr2 1275517 1281008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00167 505 844 Calmodulin-binding Proteins AT5G65930 40.407 4.96e-68 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00167 K10406 - jre:108983676 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00167 02 1275517 1281008 Tsu02g00167 02 1275517 1281008 ECH