Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00149 ATGACACAATGTTATCCACCGCGATCAATAACAAAGTCACCTTCATTGAGACTCAAAGCAATGGAAGAACCATCAAATTTTGAATTCATGTTCAATAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAAATACTAGACATGGATGGAAACTCAATCAATGTAATTCTTGTTGACAAAAGCAATGGCCAAATAGTCCCTACAAGTCTACCTCACCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCACCCGGCGAAAAAGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGAAAGAGGCCATTGCTTACAGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCTAGCTGGATTCGTAGCCGAAAGTTTAGAGTTGCCGTTAGAATTGCTCCTGGGACTAATCAAAGTGTACGAATTCGTGAAGCCATGACTGAACCTTTTGTTGTTAAGGATCACCGCGGCGAATTGTACAAGAAACACCACCCACCAAATCTAAAGGACGAAGTCTGGCGTTTAGAGAAAATTGGGAAAGACGGAGCTTTCCACAAAAAATTGGCCAAAGAAGGAATCAATAATGTACAAGAGTTTCTCAAATTATCGGTTGTTGACTCTCTTAGACTAAGAAAGATTTTAGGCATGGGAATGTCAGAGAAAATGTGGGATGTAACAATTAAGCATGCAAAGACTTGTGTAATGGGAAATAAACTATATATCTATCGTGGACCTCAAGTTACCATATATCTCAATGCCATATGTCAAATGGTTAAAGCTTATGTCAACGGTCAAATTATTTCCAACCGAGACATGGCCAGCATGAACAAGGGCTACATTGAAAAATTGGTGAGAGAAGCACATGATAGATGGAATGAGTTGGAGGAAATTGATGAAATTTTGAATGACAACAACGTTGCTTTGTTAACTCAAGGTGAGACAGTGGAGCAatttcaaaacaataataatcatCAAGCACCGGTTATAACATATGATCAAAATGACTTTTATAGTGATAAATCTCTAGAGGGTGGAAACTATGTAGCAAGTCATAATAATAATGCACAAATAGGTTGCAACCAGTGGTCACCACCACATGCTACATTACCATTCATGAATGGCATATTATCTTATAGCTTCTCAGATTTACAAACAGAAGGTGTTGATATAATGCCTTCAACTTCAAGGTGGCATTAG 1257 0.3707 MTQCYPPRSITKSPSLRLKAMEEPSNFEFMFNKKLSLPIFTGSKILDMDGNSINVILVDKSNGQIVPTSLPHPIKIEIVVLDGDFPPGEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRIREAMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLAKEGINNVQEFLKLSVVDSLRLRKILGMGMSEKMWDVTIKHAKTCVMGNKLYIYRGPQVTIYLNAICQMVKAYVNGQIISNRDMASMNKGYIEKLVREAHDRWNELEEIDEILNDNNVALLTQGETVEQFQNNNNHQAPVITYDQNDFYSDKSLEGGNYVASHNNNAQIGCNQWSPPHATLPFMNGILSYSFSDLQTEGVDIMPSTSRWH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00149 418 Pfam Calmodulin binding protein central domain 188 253 IPR046830 -
Tsu02g00149 418 PANTHER OS02G0177800 PROTEIN 3 412 IPR012416 GO:0005516
Tsu02g00149 418 Pfam Calmodulin binding protein-like N-terminal domain 28 175 IPR046831 -
Tsu02g00149 418 Pfam Calmodulin binding protein C-terminal domain 258 317 IPR046829 -
Tsu02g00149 418 PANTHER PROTEIN, PUTATIVE-RELATED 3 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00149 Tsu-Chr2 1117927 1120735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00149 7 318 Calmodulin-binding Proteins AT5G57580 49.842 1.95e-102 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00149 - - gmx:100802257 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00149 02 1117927 1120735 Tsu02g00149 02 1117927 1120735 ECH