Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00126 ATGTTAGGAGCCAATGATGGATTAATCACTGTTGCTTCACTGATGATTGGTGTTGGAGCTATAAAAGAAGATATCAGTGTACTGCTCCGTGCCGGTTTCGCCGGTTTAGTAGTCGGTGCTTGTAGCATGGCAATCGTGGGAGCATTGATTGGAAAAACTCCAATTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTGTCACCAAATTGATTGGCACTACTGAACTTTGA 258 0.4264 MLGANDGLITVASLMIGVGAIKEDISVLLRAGFAGLVVGACSMAIVGALIGKTPIMRSCVRVLIGGWMAMAITFGVTKLIGTTEL 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00126 85 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 46 82 - -
Tsu02g00126 85 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 45 IPR008217 GO:0005384|GO:0030026
Tsu02g00126 85 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 46 82 IPR008217 GO:0005384|GO:0030026
Tsu02g00126 85 Pfam VIT family 1 45 IPR008217 GO:0005384|GO:0030026
Tsu02g00126 85 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00126 Tsu-Chr2 889269 890252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00126 45 82 Nodulin-like Gene Family AT3G25190 63.158 3.59e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00126 K22736 - gmx:100790996 74.3294