Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00121 ATGCATCAGTTGGAGAGCACCACTCCTCACTTTATTCGCTGCATAAAACCAAATACTAAGAAGCTTCCTGGAATTTATGACAATGAAGTTGTCCTACAACAGCTCAgatgttgtggagttctagaaGCTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGAACCATCAAGAATTTTCCAGAAGTTGGCTGCACGAAACTTATCTTCGAGCAGGGAAGTTTGGTGCCCTGGAGGATAAGAGAAACCAGTTCTTGCAGGGTACACTTCGGATTCAAAAATGCTTCCGTGGTCATCAAGCGCGTAGCTATTTTTGTGAACTTAAGAATGGAGCAACAACATTATAA 348 0.3966 MHQLESTTPHFIRCIKPNTKKLPGIYDNEVVLQQLRCCGVLEAVRISRAGYPTRMNHQEFSRSWLHETYLRAGKFGALEDKRNQFLQGTLRIQKCFRGHQARSYFCELKNGATTL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00121 115 ProSiteProfiles Myosin motor domain profile. 1 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu02g00121 115 Gene3D Kinesin motor domain 8 50 IPR036961 -
Tsu02g00121 115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 110 IPR027417 -
Tsu02g00121 115 Pfam Myosin head (motor domain) 1 64 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu02g00121 115 PANTHER MYOSIN 68 114 - -
Tsu02g00121 115 PANTHER MYOSIN 1 63 - -
Tsu02g00121 115 PANTHER MYOSIN-2 ISOFORM X1 68 114 - -
Tsu02g00121 115 PANTHER MYOSIN-2 ISOFORM X1 1 63 - -
Tsu02g00121 115 ProSiteProfiles IQ motif profile. 87 114 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00121 Tsu-Chr2 859833 860757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00121 1 109 Myosins gene family AT5G54280 45.455 5.13e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00121 K10357 - gmx:100802074 169.088