Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00092 ATGTTGGGATCAACTTCTTCTTCTGCAATTCCCATGTCTTGTTCTCCAACTCCAAAGCATGATGTGTTCCTCAGCTTCAGAGGAGAGGATACACGTGACAACTTTATCAGTCATCTTTATGCTGAACTGGgcaggaaaaaaattgaaacatttaTGGATCACAAACTCGGTAGGGGCGAAGAGATTTCGCCGGCACTATACAAAGCAATTGAAGAATCAATGATTTATGTGGTTATTTTGTCCGAGAACTACGCTTCTTCCACTTGGTGTTTGGATGAACTCACAAAGATACTAGAATGCAGAGAGAAATATGGAAGGGATGTGATACCTGTCTTCTATAAGGTGGATCCATCAAATGTGAGGAATCAAAGAGAGAGTTATGCAGAAGCTTTTGTTAAGCATCAACGTCGATTTAAGGATGATCAACTGGATGCATGGAAAGCTGCTCTAACCCAAGTAGCTGGACTCTCTGGCTGGGATTCACAAGTAACCAGACCAGAACAAAAACTCATTGAAGATATTGTGAaagatattttaagaaaattgcaACTAAATTGTTCTTTCGTAAGTGATTATCAAGGAATGATTGGGATTAACAAACATATTGAgcaaatacaattgttgttgaacaTCGAGTCAGAGGAAGTTCGAATTGTAGGAATTTGGGGTATGGGAGGAATAGGAAAAACAACTATTGCTACTGCAATATATCACAAACTGGCAACTCAATTCAGTTGCAACAGCATCATCTTAAATGTTCAACAAGAAATAGAGAGATTTGGATTGCACAATATACGAAGCAAATATATATCTGAGCTTGTAGGGGAAAACAACACATCCTACGGATTAAGTCTTTCAAATGATCGAAAGCTCAAACGGACAAAAGTTCTCCTTGTTCTTGATGATGTGAATAATTCAGATCAACTTAATGAATTAATCGGAACACATAATAAATTTGGGAAGGGTAGTAGAATCATTGTTACTACTAGAGACATGCAGGTACTGAAGAATGTTGATGCTAATGGAATATACGAAGTCAAGGAAATGAATTTTCATGAATCTCTCCGACTCTTCAGTTTAAATGCCTTTACACAAAACTATCCCGCAGAAGATTATGTGGACTTATCAGAGAAGATATTAAATTATGCTAAAGGGGTTCCGTTAGCTCTCAAAGTTTTGGGATTTTTGCTGCGCGGTAGATCaaaggaagcatgggaaagtCAGTTACAAAAAGTGGATAAGCTTCCCCAGAATGACATTTTCAAAGTGTTGAAATTAAGTTATGAAGGGCTTGACGAAGAACAGAAGGATATATTTCTGGACATAGCTTGTTTCTATAGAGGGCATTTGGAGAATGTTGTATCACAAACACTGGATAGCTGTGGTTTCTCTGCTCACATTGGAATGGAGATTCTCAAAGATAGGTGTCTTATGTCTATATCAGAAGGTCGAATTGTGATGCATGATCTAATACAAGAAATGGGATGTGAAATTGTTCGTCAACAATGTGTCAATGATCCTGGAAAACGCAGTCGACTATGGAAGCATGAggaaatttatgaagttttaaCAAACAACAAGGGGACAAATGCAATCCAGTGCATATTCCTGGACATGAGCAAGATGGAAAAGGATCAAATACATGCTAAAACTTTCAAAAAGATGCATAATCTTAGAATGATGTTGTTCTATAAACCTCATGGTTTTTCGAAAGACTCACCCTCAAATGTGATCCTTCCTGCATGTCTTGATAGTCTTCCACatcatttaaaatttcttcGTTGGGACGGCTTCCCTAAAAACTCATTGCCTCTAAACTTCCGCCCCAAAAATCTCGTTAAACTTTATATGCCCCATAGCCATCTCGAACAACTTTGGCAGAGAGATAAGgATTTACCAAATTTGAAAACACTTGACCTTCGTGGTTCTTGGAACCTGATTCAAATACCAGATCTCGCTCAATGCCCAAATATTGAAGAAGTGATTCTTAGTAATTGCACAAAGTTGATTCAAGTTTATTCTTCTAGTTTCCTCTGCAAGATCAAATGTTTATGGTTAAATGGTTGTATTGGGCTTAGGACTTTATACATTCCTAGCAATATTCTCTTGAGCCCTTCCGGATTAATAGTGCTCCATGGTTGTCACAATCTTGAGATGTTTTCAGTTAGTAAGACAAACACACAGGTTCAACTGTATTCTTCTTCACGTGCTAAACTTAGAAGTGTTACCCAATTTGATAATTTCTCAGATATTTTTGATCCCTTGGATTATGCTGAACTGAACAAAGAACCAAAGGATAATATACAATTACTAAACTTAGAAGTGTTGAGAGAAGGTTCGCCAACATCATTTCCAAGTCTCAACGAGCTTTGTTGGTTAGATCTATCCTTTTGCGAATCCCTCTTGAGCCTTCCCATTGACCTTtttaagttgaaatttctaAGAAGGCTTTACCTCAGTGGTTGCTTGAGTTTGGAGAAGTTTCCTGAAATTGAGGAGACTATGGAAAGTTTGGTGGTGCTCATCTTAGACAAAACAGCAATCAAGGAACTACCTTCATCCTTGCACCGTTTGGTCAGCCTTGAAGAATTGAGCTTGTACAATTGCCAGAAGCTTGAGACTGTTCCTTCTTCCATTGGAAGTCTGTGCAAACTTGACAGGTTAAACCTTACCTGTTGTGAATCCCTTGAAACTTTTCCAAGCGCCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAGATCTTGGAACCTGCAGAAACTTTTGTTCACATTAACTTAACAAAAACAGCAATTAAGGAACTTCCTTCATCTTTGGAGTATTTGGTTGGGCTTCAGACCTTGTGCCTGAAGTTATGCACTGAACTGGTGTCACTTCCAAACAGCATTATTAATCTAAACTATCTATCTGAGCTTGATTGTTCTGGCTGTTGCAGTTTAACAGAAATCCCAAATAACATTGGTGGTTTTCCATCATTGAGGAAACTGTCACTGCAAAATACCAGTGTTGTGAACCTTCCTGAGAGCATAGCGCATCTCTCCAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAGGTTATCCCACAACTTCCAGCAACTCTAAACCAGTTGTTTGCATATGATTGCCTGTCTGTTAGAAGAATGATGCCAAATTCAAGGTTGGAATTCCCATCAAACTCCGACAAGGATTACTTCAAATTTCATTTCACCAATAGTCAAGCACTGGACGAAACTGCTTGCAATAATATTGGAGCTGAAGCATGGCTTAGGATCACCGAGGATGCATTTAAGTCTGTGTTCTTCTGTTTCCCTGGGAATGCTATTCCTGGTTGGTTCCCTTATCGTTGTACGGGATGTGTGGTAATCACgaaaaaatattctttaaattCTCCCAATAACAATAGACTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGACGCGTGGATGATGGCTTTACATACAGACTAACATTTGAATCTGATGGTGGCACATACATTCTTTCTGACAATGacaagataaaaaattatttctattggAAGGATCCAAATAGGTCAGTCCTCCAAGATCACACATTCGTATGGACACATCACCTGGACTTTGCAAGCATTGGAAACAGGCTCTTTGATGCACACAGCTTCACTTTTGAATTCAGAAAACATAGTTATCTCTCATATCATAAATCAGGTGTCACGGACATTGAAGAACCGAGTGGGATGCTGCATTATAATAGTTTTTATGGAAACAAACCAAAGAAGATGGTTGACTACTACAGTACTTTGAACACCTTTTATGGCATTCCATGGATTCCTTTGTAA 3855 0.3722 MLGSTSSSAIPMSCSPTPKHDVFLSFRGEDTRDNFISHLYAELGRKKIETFMDHKLGRGEEISPALYKAIEESMIYVVILSENYASSTWCLDELTKILECREKYGRDVIPVFYKVDPSNVRNQRESYAEAFVKHQRRFKDDQLDAWKAALTQVAGLSGWDSQVTRPEQKLIEDIVKDILRKLQLNCSFVSDYQGMIGINKHIEQIQLLLNIESEEVRIVGIWGMGGIGKTTIATAIYHKLATQFSCNSIILNVQQEIERFGLHNIRSKYISELVGENNTSYGLSLSNDRKLKRTKVLLVLDDVNNSDQLNELIGTHNKFGKGSRIIVTTRDMQVLKNVDANGIYEVKEMNFHESLRLFSLNAFTQNYPAEDYVDLSEKILNYAKGVPLALKVLGFLLRGRSKEAWESQLQKVDKLPQNDIFKVLKLSYEGLDEEQKDIFLDIACFYRGHLENVVSQTLDSCGFSAHIGMEILKDRCLMSISEGRIVMHDLIQEMGCEIVRQQCVNDPGKRSRLWKHEEIYEVLTNNKGTNAIQCIFLDMSKMEKDQIHAKTFKKMHNLRMMLFYKPHGFSKDSPSNVILPACLDSLPHHLKFLRWDGFPKNSLPLNFRPKNLVKLYMPHSHLEQLWQRDKDLPNLKTLDLRGSWNLIQIPDLAQCPNIEEVILSNCTKLIQVYSSSFLCKIKCLWLNGCIGLRTLYIPSNILLSPSGLIVLHGCHNLEMFSVSKTNTQVQLYSSSRAKLRSVTQFDNFSDIFDPLDYAELNKEPKDNIQLLNLEVLREGSPTSFPSLNELCWLDLSFCESLLSLPIDLFKLKFLRRLYLSGCLSLEKFPEIEETMESLVVLILDKTAIKELPSSLHRLVSLEELSLYNCQKLETVPSSIGSLCKLDRLNLTCCESLETFPSAIFKLKLTKLDLHGCSMLKTFPEILEPAETFVHINLTKTAIKELPSSLEYLVGLQTLCLKLCTELVSLPNSIINLNYLSELDCSGCCSLTEIPNNIGGFPSLRKLSLQNTSVVNLPESIAHLSSLKSLDLSDCKRLEVIPQLPATLNQLFAYDCLSVRRMMPNSRLEFPSNSDKDYFKFHFTNSQALDETACNNIGAEAWLRITEDAFKSVFFCFPGNAIPGWFPYRCTGCVVITKKYSLNSPNNNRLVGFALSVVLGRVDDGFTYRLTFESDGGTYILSDNDKIKNYFYWKDPNRSVLQDHTFVWTHHLDFASIGNRLFDAHSFTFEFRKHSYLSYHKSGVTDIEEPSGMLHYNSFYGNKPKKMVDYYSTLNTFYGIPWIPL 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00092 1284 Gene3D Ribonuclease Inhibitor 512 907 IPR032675 -
Tsu02g00092 1284 Gene3D Ribonuclease Inhibitor 908 1060 IPR032675 -
Tsu02g00092 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 860 1060 - -
Tsu02g00092 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 782 879 - -
Tsu02g00092 1284 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 733 - -
Tsu02g00092 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 860 1060 IPR044974 GO:0006952
Tsu02g00092 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 782 879 IPR044974 GO:0006952
Tsu02g00092 1284 PRINTS Disease resistance protein signature 1021 1037 - -
Tsu02g00092 1284 PRINTS Disease resistance protein signature 383 397 - -
Tsu02g00092 1284 PRINTS Disease resistance protein signature 218 233 - -
Tsu02g00092 1284 PRINTS Disease resistance protein signature 290 304 - -
Tsu02g00092 1284 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Tsu02g00092 1284 Pfam TIR domain 19 185 IPR000157 GO:0007165
Tsu02g00092 1284 SUPERFAMILY L domain-like 780 1055 - -
Tsu02g00092 1284 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 159 IPR035897 -
Tsu02g00092 1284 Pfam NB-ARC domain 200 428 IPR002182 GO:0043531
Tsu02g00092 1284 Gene3D - 198 349 IPR027417 -
Tsu02g00092 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Tsu02g00092 1284 Gene3D - 350 432 IPR042197 -
Tsu02g00092 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 733 IPR044974 GO:0006952
Tsu02g00092 1284 Gene3D - 17 188 IPR035897 -
Tsu02g00092 1284 SUPERFAMILY RNI-like 590 844 - -
Tsu02g00092 1284 SMART till_3 19 156 IPR000157 GO:0007165
Tsu02g00092 1284 SUPERFAMILY "Winged helix" DNA-binding domain 419 523 IPR036390 -
Tsu02g00092 1284 Pfam Leucine Rich Repeat 611 629 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00092 Tsu-Chr2 637493 643580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00092 789 958 WRKY Transcription Factor Family AT4G12020 35.882 8.60e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00092 - - ccaj:109803335 1420.99