Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00075 AtggggaagaagaagaagagagttgCTTCAAAAGTTTGGTGTTATTACTGCGATCGAGAATTCGATGACGAGAAGATCTTGGTTCAGCATCAGAAAGCTAAACACTTCAAGTGTCATGTTTGTCATAAGAAACTTTCAACTGCTGGTGGCATGTCCATTCACGTTCTTCAGGTCCACAAGGAAAACGTCACCAAgGTGCCAAATGCGAAACCTGGAAGAGAGAGTACAGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATGTCTTGGCTGCTCATTATGGAGATGAAGAGGACGATGTTCCCTCAAAGACCGCCAAGGTGGATATCGCATCAACCCCATTTGCAGGTGGAATGGCGCCACCTCCTATGGGTGCCGGATATCCTCCCCGACCAACCTTGGGCCCAATTCGACCAGTATATAATCCTGCTCTACCGGTACCTCCTAATGCTTGGGGAGTGGTTCCACCTCGACCTCAGCCATGGTTTCCCCAGCCTCCAGCTGTTTCAATTCCCCCTTCTGGTCCATACGCACAACAACCATTGTTTCCTGTGCAGAATGTGAGGCCTCCATTGCCATCAACTAATTCTCCTGCATCACACATTCAGATTACTCCGCCTGGACTACCTACATCTACAGCTTCTGTCCCAGTTTCACAACCTTTATTTCCTGTTGTTGGAAATAACCACACGACAACCCAAAGTTCACCATTTTCTACTGCATCTCTGTCTTCAAGTGTTCCATCAATGGCTCCCATGCTTTCTTCAAATGTCCCTATTGACGCACATTTGGGCATCAACTCCTCTGTGACAAGTAGTTATCAAGCATTTGGGCTTCCAGGCGGGATAGCAAGTAACTCACATTCTTATGCTTCTGGCCCAAATACTGGTGGTCCTTCAATTGGACCTCCCCCAGTAATTTCAAACAAAGCTCCTGCTTCTCAGCCTGCCACTAATGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTAACAAAATATCAGGTGCATGATGAAAGTAGCCAGGTAAGTCATACTACCTCTTTATTACATGGAGTTGCTTTCACATCTAACCAGATGAGTAGGCTTTATGCTTTCTGTTTTCAGATTCAATTGTTTACACATATTAAAAGAGgtacattatatataaatttccAACCagtttaa 1194 0.4313 MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGDEEDDVPSKTAKVDIASTPFAGGMAPPPMGAGYPPRPTLGPIRPVYNPALPVPPNAWGVVPPRPQPWFPQPPAVSIPPSGPYAQQPLFPVQNVRPPLPSTNSPASHIQITPPGLPTSTASVPVSQPLFPVVGNNHTTTQSSPFSTASLSSSVPSMAPMLSSNVPIDAHLGINSSVTSSYQAFGLPGGIASNSHSYASGPNTGGPSIGPPPVISNKAPASQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQVSHTTSLLHGVAFTSNQMSRLYAFCFQIQLFTHIKRGTLYINFQPV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00075 397 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Tsu02g00075 397 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Tsu02g00075 397 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 359 - -
Tsu02g00075 397 SMART c2h2final6 12 35 IPR013087 -
Tsu02g00075 397 SMART c2h2final6 36 59 IPR013087 -
Tsu02g00075 397 PANTHER ZINC FINGER PROTEIN 207 1 359 - -
Tsu02g00075 397 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Tsu02g00075 397 Gene3D Classic Zinc Finger 2 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00075 1 392 C2H2 Transcription Factor Family AT1G30970 58.049 1.45e-144 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu02g00075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00075 - - gsj:114421245 609.372