Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00042 ATGGGTGGTGGAGGAACCATCGCGGAAGGGATTCGTCGCTTGTTTCAACGGCGCTCTTCAACTTCTagtaaacataataataataataataatcttgaTGACCGCATCTTGGTGAGTGATTTGCGCTCACAGTTGGCTAATATTCCTACCACTAACCATCACGATCCTCCTTCTGCTTCTGCTTCTCAACCTCTCTCCAACATCAAAGTCCCCATTTacccatcttcttcttcttccatggATCCCAACAAAAAGGGTTCACCTGAAACCGAGTTTTTTACCGAGTATGGAGAGGCAAGTCAATACCAGGTCCAAGAAATCATTGGAAAAGGAAGTTATGGTGTTGTGTGTTCTGCAATTGACACTCATACTGGTGAAAAAGTTgcaatcaagaaaattaatgatgtttttGAGCATGTATCAGATGCCACAAGGATCCTAAGAGAAATCAAGCTCTTGCGCTTGCTCCGACATCCTGATATTGTAGAAATTAGGCATATTATGCTTCCTCCTTCCCGCCGAGAGTTCAGAGATATCTATGTTGTGTTTGAGTTGATGGAATCTGATCTGCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAACACCACCAATTTTTCTTGTACCAACTTCTTAGAGGCCTCAAATATATACATTCTGCAAATGTGTTTCACCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCCCCATCTGCTATATTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACTGGTAGGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCCGAGTCCATTGCGAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAATAGCATGCGAAAAAAGCAACCTGTTCCATTATCCCAGAAATTTCCAAATATAGATCCTTTGGCTCTTCGTATACTGGAGCGCTTACTTGCATTTGATCCTAAAAACCGTCCATCAGCCGAAGAGGCATTGTCTGATCCTTATTTCCATGGTTTATCAAACATCGATCGCGAACCATCCACTCACCCCATTTCAAAACTTGAGTTTGAATTTGAGAGAAGGAAAGTGAATAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATCTTCGTGGTGGAGACCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAAGGCGAACGAAGCTCACCATTGCAGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCATACTTCCAagaatgaaaataatgaaaacaacgATGTTGAAATGTCGACCGGACCAAATCTTCAGAGTCCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTGAAAAAAAGTAAAGATCAAGAGCAGGAACCAATTATGGAGGTCAATGACGACGCAGCAGATGAATTGACAGATAACATTGCTGCCCCGCATGCTTAA 1701 0.3974 MGGGGTIAEGIRRLFQRRSSTSSKHNNNNNNLDDRILVSDLRSQLANIPTTNHHDPPSASASQPLSNIKVPIYPSSSSSMDPNKKGSPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDIMTDLLGTPPPESIARIRNEKARRYLNSMRKKQPVPLSQKFPNIDPLALRILERLLAFDPKNRPSAEEALSDPYFHGLSNIDREPSTHPISKLEFEFERRKVNKDDVRELIYREILEYHPQMLEEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVHTSKNENNENNDVEMSTGPNLQSPRSLLKSASISASKCIDVKKSKDQEQEPIMEVNDDAADELTDNIAAPHA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00042 566 Gene3D Transferase(Phosphotransferase) domain 1 188 416 - -
Tsu02g00042 566 MobiDBLite consensus disorder prediction 503 527 - -
Tsu02g00042 566 CDD STKc_TDY_MAPK 101 438 - -
Tsu02g00042 566 SUPERFAMILY Protein kinase-like (PK-like) 98 398 IPR011009 -
Tsu02g00042 566 SMART serkin_6 102 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00042 566 MobiDBLite consensus disorder prediction 472 566 - -
Tsu02g00042 566 MobiDBLite consensus disorder prediction 47 90 - -
Tsu02g00042 566 MobiDBLite consensus disorder prediction 47 85 - -
Tsu02g00042 566 ProSitePatterns Protein kinases ATP-binding region signature. 108 132 IPR017441 GO:0005524
Tsu02g00042 566 Gene3D Phosphorylase Kinase; domain 1 117 439 - -
Tsu02g00042 566 Pfam Protein kinase domain 102 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00042 566 ProSitePatterns MAP kinase signature. 137 240 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu02g00042 566 ProSiteProfiles Protein kinase domain profile. 102 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00042 566 MobiDBLite consensus disorder prediction 488 502 - -
Tsu02g00042 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 68 522 - -
Tsu02g00042 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 68 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00042 Tsu-Chr2 266295 271612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00042 1 554 MAP Kinase Gene Family AT1G73670 69.915 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g00042 Pkinase 7.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00042 - - gmx:100780831 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00042 02 266295 271612 Tsu02g00042 02 266295 271612 ECH