Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00040 ATGAAGAACATTCTTAAAAAGCTTCATATAATGTCTAATAATCAGTCAGAAGATGCACAATCAGAAAGGAACAACAAGTCAAATGATGGCTCATCTTCATCTCCTACAACCAGAAAGAAGCTTTCAAATTGGTTGCAATCGGTTTCTTCTAATAGGCAGAGTCCCAGCAGTCCTCCATCACCACACCTGGCAAGAGGAGAGCTATCTGATTCGGTGAgttttggtggtggtggtttggATATGGTGGTTTGTGATTCGATGAAGCATGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAGATTCAACTTGCTCTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTTGCATATAGATACTGGAATTACAATGCTCTTGGCTATGATGACAAGATTTCAGACGGTTTCTATGATCTGTATGGTGTCTTAACCGATTCAACCTCGACAAGAATGCCTTCTCTGGTAGATCTGCAAGGAACACCAACTGCAAATGATGTAAAATGGGAAGCAGTCTTGGTCAATAGGGTTGCCGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCTTGGAGCTTGCAGTGAAGTCAAGAGGAGATTTTGAAATAGTTGTAGATAGAAATTTGGTAAACAAACTTTCAATACTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGATCATTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTATTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCAGATGATGTGGCAATGAACTTTGTCAAGATTGATGAGGGAAGGGAATACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAACTGGTTCACATATTGAGTATGATGATTCTTCTTTTATAGCCAGTCCTTCATCAAGAGACCTTGATTCATCACACATTGCATCGTTCAGCACCGGGGTTGGAAGTTCATCGGGAGAAACTTCAGAGTTAGCGGCTTTTGATAAAGGAAACAGATACAAACATTTTGCCTATGCAGAGAAGGAATCTGATGTAAGTAGCCCCCCCACTGGCAAGGAAGAATCAAAGAAACCACTAAACGAATTCAAAAATATCCCTAACGTAGAAAAGATCAAGGCGAGGGAGTCTGTTAGCAGACCTAATAATTATCCATACACGCATGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCGCCGGCAGCACATCGGATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCCAAGGAAAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGTTAGGTTcccaaaatgaggccaattctccaactgaagaaaaagatgaatatAAACAGGGAATTGCGCAGAACGAAGATACAGTTGGCGATAATATAGGTCCTCCTCGATTTTTGCCTCCGTTGCCTCCCCACCGAATTCATCCCAAAGCAAGTCCTAGCAATCAGCTGGAGCATTCGAAGCCTGTAGAGGGTTTGGGAATTGGCCTTTCTCTTGATACAAGAGAAGCTGCTGGACAGCACATACATTCCGAGGCAGAGGCAACACAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGCGGCTGCGGCTGCGGCTGCTGTTGTTGCGTCTTCAATGGTAGTTGCTGTGGCAAAGTCAAACACTGATTCACATTTTGAGATTCCTGTAGCGGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAATAAACAGTATGAGCAGGGTAATCGAAGTGACGGAGATACTGATGGTTCTGGTAATGTGCTAAAAGGTAGCGGTGATGGAAAGAATAATGCTTTAGGAGCAAACTCAGAAGGCGAGCGAAAATCTGATAGATCAGTAGGTAATGATAGCACAAAATCTGATTCTGCACTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGATGGGTGAGCGTATCGGACTTGGATCATATGGAGAAGTGTATCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTACTTCAAGATATCTCTGGGGAATCActtgaagaattcaaaagtgagGTCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCCATAACTCGACCACCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCATCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAACTATTTGCACAACAGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAACCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGCTTGTCTCGAATGAAGTACAGTACATTCCTTTCTTCTAGATCAACTGCGGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTACGGGGTCATATTATGGGAGCTCTCTACTCTGCGGCAACCCTGGGGAGGAATGAATCCCATGCAAGTTGTTGGTGCTGTCGGTTTCCAGCATCGCCGTCTGGACATTCCAGATGATGTGGACCCTGCCATTGCAAATATTATTAGACAATGTTGGCAGACAGATCCAAAGTTGAGGCCCACTTTTGCTGAAATCATGGCATTACTGAAGCCATTGCAGAAGCCAATTACTGGTTCTCAAGCGCAGAGAGCAAGTGCTCACAACACATCATCGCGAGTTGCTGAAAATCCTGCAGAATAG 3066 0.4247 MKNILKKLHIMSNNQSEDAQSERNNKSNDGSSSSPTTRKKLSNWLQSVSSNRQSPSSPPSPHLARGELSDSVSFGGGGLDMVVCDSMKHDSGSSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTDSTSTRMPSLVDLQGTPTANDVKWEAVLVNRVADSNLLKLEQKALELAVKSRGDFEIVVDRNLVNKLSILVAEYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFIASPSSRDLDSSHIASFSTGVGSSSGETSELAAFDKGNRYKHFAYAEKESDVSSPPTGKEESKKPLNEFKNIPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGSQNEANSPTEEKDEYKQGIAQNEDTVGDNIGPPRFLPPLPPHRIHPKASPSNQLEHSKPVEGLGIGLSLDTREAAGQHIHSEAEATQVKYGKNVPVAAAAAAAAAAAVVASSMVVAVAKSNTDSHFEIPVAAAATATAAAVVATTAAVNKQYEQGNRSDGDTDGSGNVLKGSGDGKNNALGANSEGERKSDRSVGNDSTKSDSALDDVAEYDIPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAIANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITGSQAQRASAHNTSSRVAENPAE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00040 1021 Pfam Protein tyrosine and serine/threonine kinase 739 990 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 ProSiteProfiles Protein kinase domain profile. 739 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 1000 1021 - -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 407 428 - -
Tsu02g00040 1021 SMART serkin_6 739 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00040 1021 Gene3D Phosphorylase Kinase; domain 1 732 816 - -
Tsu02g00040 1021 CDD STKc_MAP3K-like 745 991 - -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 1 70 - -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 544 579 - -
Tsu02g00040 1021 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1009 - -
Tsu02g00040 1021 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1009 - -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 447 465 - -
Tsu02g00040 1021 ProSitePatterns Protein kinases ATP-binding region signature. 745 766 IPR017441 GO:0005524
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 674 726 - -
Tsu02g00040 1021 SUPERFAMILY Protein kinase-like (PK-like) 727 990 IPR011009 -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 8 60 - -
Tsu02g00040 1021 Gene3D Transferase(Phosphotransferase) domain 1 818 1003 - -
Tsu02g00040 1021 MobiDBLite consensus disorder prediction 440 465 - -
Tsu02g00040 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Tsu02g00040 1021 PRINTS Tyrosine kinase catalytic domain signature 962 984 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 PRINTS Tyrosine kinase catalytic domain signature 899 909 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 PRINTS Tyrosine kinase catalytic domain signature 813 826 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 PRINTS Tyrosine kinase catalytic domain signature 852 870 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 PRINTS Tyrosine kinase catalytic domain signature 918 940 IPR001245 GO:0004672|GO:0006468
Tsu02g00040 1021 Pfam Ethylene-responsive protein kinase Le-CTR1 142 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00040 Tsu-Chr2 241334 249113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00040 1 1005 MAP Kinase Kinase Kinase AT1G73660 62.123 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tsu02g00040 PK_Tyr_Ser-Thr 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00040 - - gmx:100778331 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00040 02 241334 249113 Tsu02g00040 02 241334 249113 ECH