Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00007 ATGGCTTCTTCTCCTCCTGCTGCTCATCACTCTATGaaTAATAATAACAGAAGATGGAAGCAAACAATTCTACTTTCATTTCAAATTGTTGGAGTTGTTTATGGTCAACTTAGCACTGCTCCCTTATATGTGTTTAGTACAATGCGAGTCAAAGATCTTGAATCCGAGGAGGTTGTTTATGAACTCTTCTCCTTCGTTTTTTGGACTCTCACAACTATTTCTTTCATCAAGTATGCCCTCATAGTCCTCAAAGCTGATGATAAAGGAGAGGGTGGTACTTTTGCTTTATACTCACTGTTATGTAGAAATGCAAAAGTTGGGTTACTCCCTTGCGATAAAACCACCAACGAGGTCGTGCTTTTTGAAGaggaaacaacaacaaatcctTCTTCTAAGATCAACATCAGTTCTGATTCCAAAGCACGAAGGGCCATTGAGAAACACAAATCCTCCCACTATTTCATATTGTTCCTGGCCCTCTTTGGTTCCTGTATGACAATTGGGGCCGCAGTCCTCACTCCAGCTCTCTCAGTGTTATCAGCTTCATATGGTGTTCAGCGATCCTTGTCAGAAATGGCAATCCTATTTTCCTCGTCACACCATACTCGGGATTCTGTGTCAAATGTTCTACAAAAATATGTGCCCGTTCCCTCTGCGTGTGTTATATTGATTGGCCTTTTCGTACTGCAGCCTTGTGGTACACATAAAATTGGGTTCATGTTTGCTCCAATTATTGCTGTTTGGCTTTTGTTTGTTGGTGTGGTGGGCGCGTATAATATATTCTACTGGGatgttaaaattatttataaaatatcacCACTATACTTGTTCAAATTCATGAGGAATCTTGATATCGGCAGATGGAGGTTGTTAGGGAGCGCCATTTTATGTGCAGCAGGATCAGAGGCAATGTTTGCAGGCCTAGGCCATTTTTCCAAGAAATCAATCAAGATTACATTTATTTGCTTGATATATCCGCTTCTTGTGATATGCTATGCGGGTCAGGCTGCGTATATCTCTAAAAATTTGCACACTCAAGATTTTAATCATCTTAGTCAATCCGTGCCAAGTCATTCCAAACATATATTCATAATATTATCCCTACTTTCTTCGGCAGTCGGAAGCCAAGCAACTATAACAGCGAGCTTCTCCATCATTAACCAGTGTCTGGCACTAAATTGTTTTCCTAGAGTGAAAGTCATTCACACATCAAAAACGATACACGGCCAGGTTTACATCCCAGATGTCAACTGGTTATTGATGATTTTCAGTCTATCTGTCACAGTTGGTTTCAGAGACTTGGTGAAGATTGGCAACGCAACAAGTTTGGCTATAATATGTGGAATGCTGGTGACAACCAGTCTCATGTCACTAATCATTGCTTTGTATTGGGAGAAAAATTTGATGATATCAGCATGCTTTTTGGTATGTTTTGGCCTTGTTGAGGTTGCATATCTTTCAGCATGTATGCTGCAGTTTCACAAGGGAGCTTGGTATCTACTTGTCCTTCTGGTGGTGTCGATGACAGTCATGCTTTCATGGCATTATGGAACAGTGAAGAAGTATgagtttgatttgcaaaacaagGTGTCAACTGAATGGCTAATAGATGTTAGTCCAGGCCTTGGCATTTCAAGGGTAGCTGGAATTGGCTTCATTTACACCGACATAGTAGCAGGAATCCCAGCTTTCTTTTCGCATTTTATTACAAATCTTCCTGCATTTCATCAAGTGTTGATCATGGTGTCCTTCAAGTCTATGGCGGTGCCACATGTTCCCGAATGTGAAAGGTACCTGATAGGAAGGATTGGGCCAaaagattataaaatatatcGTTGCATTGTGAGATATGGATATTGCGATAATAATATCAGGGACACGGGTGATTTTGAAGAGAAAATCATTGGTGCTATAGGAGAATTCATTTCCATTGAACAGATGAGTGACATTGAATCAATGGTTTCGGCAGAAGAAAGAATGATGATAGTAGGAAATTCATCATCGCAGACAGATGGAAAGGCTTTAGTGCCTTTGATGAATGAAACATGCAACGAAGTGAGCATTATTAATGAAGCTCAGATTAGCCCGGTAGTAGTAATTGATGAAAGTGATCATAAGTTGTTAGCGAGTAGTAGTTcttgcaaaaaaagaaaaaaagttaggtTCATGTTGCCACCAGCTAGTAGTAGTCCTAAAATGGAAGAATCTGTGAGGAAGGAGCTGTTGGAACTAATTGATGCAAGGGAGAGTGGAAGTGCCTATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTATCTCAAGAGATTCTTAATAATGGTTTTTCgtttctttgaaaaaaatggCAGGGAACCTCCTGTTGCTCTCAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGTATGATATGtactatataa 2427 0.3861 MASSPPAAHHSMNNNNRRWKQTILLSFQIVGVVYGQLSTAPLYVFSTMRVKDLESEEVVYELFSFVFWTLTTISFIKYALIVLKADDKGEGGTFALYSLLCRNAKVGLLPCDKTTNEVVLFEEETTTNPSSKINISSDSKARRAIEKHKSSHYFILFLALFGSCMTIGAAVLTPALSVLSASYGVQRSLSEMAILFSSSHHTRDSVSNVLQKYVPVPSACVILIGLFVLQPCGTHKIGFMFAPIIAVWLLFVGVVGAYNIFYWDVKIIYKISPLYLFKFMRNLDIGRWRLLGSAILCAAGSEAMFAGLGHFSKKSIKITFICLIYPLLVICYAGQAAYISKNLHTQDFNHLSQSVPSHSKHIFIILSLLSSAVGSQATITASFSIINQCLALNCFPRVKVIHTSKTIHGQVYIPDVNWLLMIFSLSVTVGFRDLVKIGNATSLAIICGMLVTTSLMSLIIALYWEKNLMISACFLVCFGLVEVAYLSACMLQFHKGAWYLLVLLVVSMTVMLSWHYGTVKKYEFDLQNKVSTEWLIDVSPGLGISRVAGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLIMVSFKSMAVPHVPECERYLIGRIGPKDYKIYRCIVRYGYCDNNIRDTGDFEEKIIGAIGEFISIEQMSDIESMVSAEERMMIVGNSSSQTDGKALVPLMNETCNEVSIINEAQISPVVVIDESDHKLLASSSSCKKRKKVRFMLPPASSSPKMEESVRKELLELIDARESGSAYFLGQSHLVVRDGSNYLKRFLIMVFRFFEKNGREPPVALKIPHAALVEVGMICTI 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00007 808 PANTHER POTASSIUM TRANSPORTER 14 807 - -
Tsu02g00007 808 TIGRFAM kup: potassium uptake protein 25 808 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu02g00007 808 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 807 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu02g00007 808 Pfam K+ potassium transporter 27 620 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00007 Tsu-Chr2 52172 56469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00007 13 808 Inorganic Solute Cotransporters AT1G70300 44.099 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00007 K03549 K12236 gmx:100801073 1222.61