Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g05041 ATGCTTACCCTTTTAGCATTAAACATTCCCTTATCTTTAATTTGGTTTAACATAAGCAACGTTCCCATAGCATTGGGCCAAGATCATGAAATATCAACAGAAGCTTTAACATTTAATAGATGGATAATCCCTGGCCTTTTTGGATATGCTATCATTCAATGCTTTAACGGATTTCTACATCAACATTTTTCCAATGCTTATATCAGGAAAGCTGCTCTTCTCAAGCCATCcaaagaaaaatattgtaatcaattGGTTGATCAATTGGGGAAGCAAAACAAGACCGGCCGTGAAGCATCAAAGGAAATGGTGGAAGCAAAGTTAACAACCATATATGGGAAAAGCAGCTTGAGGACTAGTAATAGTTCCAAAAGTTTTTTCAACTTGAAAAATATCAACTCTGAGGACTGCATGAAGGAAAATCTAGTTGTTATTGACTTAAAGTATAGTAGTATTAAACAAGTTTGGAATGAAACCAAGTTGTTGGAGAACCTAAAAATTCTCAATCTGAGTCATTCCAAGTACTTGAAAAACACCCCTGATTTCTCAAAATTACCGAATCTTGAAAGTCTTATTATGAAGGACTGTCCAAGTTTGTCTGATGTAAACCCATCCATTGGAGATCTCAAGAATCTTCTTCTGTTAAATCTGAAGGACTGTACAAATCTTAGAAATCTCCCAAGGAAGATCTATCAATTGAAGTCTTTGAAAACTCTCATACTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACATAGTACAGATGGAATCCTTGACGACGCTGATTGCTAAAGGGATTCGCGACAAACTGTTCTAG 822 0.3528 MLTLLALNIPLSLIWFNISNVPIALGQDHEISTEALTFNRWIIPGLFGYAIIQCFNGFLHQHFSNAYIRKAALLKPSKEKYCNQLVDQLGKQNKTGREASKEMVEAKLTTIYGKSSLRTSNSSKSFFNLKNINSEDCMKENLVVIDLKYSSIKQVWNETKLLENLKILNLSHSKYLKNTPDFSKLPNLESLIMKDCPSLSDVNPSIGDLKNLLLLNLKDCTNLRNLPRKIYQLKSLKTLILSGCSKIDKLEEDIVQMESLTTLIAKGIRDKLF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g05041 273 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 134 263 - -
Tsu01g05041 273 SUPERFAMILY L domain-like 125 264 - -
Tsu01g05041 273 Gene3D Ribonuclease Inhibitor 77 268 IPR032675 -
Tsu01g05041 273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 134 263 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g05041 Tsu-Chr1 57101479 57109628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g05041 125 263 WRKY Transcription Factor Family AT4G12020 33.333 5.18e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g05041 - - lja:Lj3g3v0744690.1 212.231