Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04965 ATGGAGATTTCTTCATTCCCTACTTTCAAACCGCTTTCCAATTCCCTGCCTTATCAATTCCGCTGTCGATGCTCTCTTTCTCTTCCTCACTGCAATTATGGCTTTCGTCGGAATCGCAGCAATTCAAAACCGTTTCTACAGATCAGAATGTGCTCGGAGAAAGTTCAATCGAACGGTTACGGCGGAATTGATATTGAAGAAACTAAATCCGATTTCGTCGAAGTCATTGCCATTGGTGGTAGGAAGGATGCGGTTCTTGATTTTTGCTTAAACTCGCCGTTTCAGTTGTCTTCTCTGCGCTTTTGGAATGTCATTGTGAAAGATTCACAAGAGGTGCAATTACAGCAAAGGTCTACTAAAGAAGAACCTAACCCAGGAATTGTCGAACCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGACCGGACCACACCGTCGctgttgatatttttgaaactGTAAGGTCCACAGATGGACTCACAGTTGCTGTAGTTTTGAAGCCTTTTAGCTTTGAAGGGATAAGACGAAAAGATGAGGTAAATGCTTTGATGGGGAAGCTTAAGGAGAATACTAATTTACTTATCGAAATTGATATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCGGAAATGcacaaaaaatttatagataGATTGCACAGTAGCATGAAAGAAACATCCAATTCAGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAAAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGTAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGAGAGCGATATAGCAGTATTTTTGCGTACTTTCCGTCAAATAACTGAATACACGAGGGATATTATAATGTCAACAGTACTTGAGCCTGATGTAGAGCCCAACCTACTGATCACGACTGTCCTTACACTTGGCAGCTTAACCGTGCAACAACCTTCCCAGAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCGTGTATTTAGCTTTTGGGGAAGACATAGTCAGCAACAAATTGTCTCTGGGAAAGAGGATGCAGTATCTTCTCATGAAATGATAAGATCTTATGACAGTAATGAGGGGGAAAATAGGATTACTCCTAGTATTGTTGACGAAAGATTTGACAAGCGCTATACAGAATTGGAGCCAGACGTGAGCAACAACAGCTCAAAATTATCTGCTTCGAGGGATTctgaaaaaaatgaagatttatTTGACACCATAGCCAATTGTCCTATCCCTTATGaatccattaatgaagaagGCGACTCTGCTTTTCAGAGGGAGCAGCTTGGAAAATGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGCTACACCAATAGTTGATAACCTAAGCATATTCCACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTTTAGAAAAGCATGAGCCGGATGCAGGTGTGGAAGCAGTGGTGGAATTTACATCTTCACTTTTGAAGGCAAAAAATGCTAATAGTAATAAACCAAAGAAGCACGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGCCCTGTTGTGGAAATACAATACAGGGGAGGAAGATACAAGGGACGGTGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGATTATGGCACAGTGGCAAGAGATCAGGTCCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTCTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGATTTTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGGCATGGGGAGTTTTTCTGTGTGAATGCAAATGGAACGAGGTACACTGAAGCTTGGGAACACGGTGTTCTTTTAGACAGCAAGCGTTTAGATAGATGA 2223 0.4107 MEISSFPTFKPLSNSLPYQFRCRCSLSLPHCNYGFRRNRSNSKPFLQIRMCSEKVQSNGYGGIDIEETKSDFVEVIAIGGRKDAVLDFCLNSPFQLSSLRFWNVIVKDSQEVQLQQRSTKEEPNPGIVEPPVFMKSCSKTIVLVASAGYGPDHTVAVDIFETVRSTDGLTVAVVLKPFSFEGIRRKDEVNALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHKKFIDRLHSSMKETSNSEIIKILECYKEAKIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSVVICIIACSEPINESDIAVFLRTFRQITEYTRDIIMSTVLEPDVEPNLLITTVLTLGSLTVQQPSQNGGILSKLALHFPRVFSFWGRHSQQQIVSGKEDAVSSHEMIRSYDSNEGENRITPSIVDERFDKRYTELEPDVSNNSSKLSASRDSEKNEDLFDTIANCPIPYESINEEGDSAFQREQLGKWNLGPGFEVAKEWAQEREADATPIVDNLSIFHLPVGVRPSEELKDCLEKHEPDAGVEAVVEFTSSLLKAKNANSNKPKKHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLQDGNIYDGLWHSGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGEFFCVNANGTRYTEAWEHGVLLDSKRLDR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04965 740 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 562 740 - -
Tsu01g04965 740 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 605 731 - -
Tsu01g04965 740 Gene3D Tubulin/FtsZ, GTPase domain 117 363 IPR036525 -
Tsu01g04965 740 SMART morn 629 650 IPR003409 -
Tsu01g04965 740 SMART morn 652 673 IPR003409 -
Tsu01g04965 740 SMART morn 606 627 IPR003409 -
Tsu01g04965 740 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 19 550 - -
Tsu01g04965 740 SUPERFAMILY Tubulin nucleotide-binding domain-like 75 239 IPR036525 -
Tsu01g04965 740 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 562 740 - -
Tsu01g04965 740 Pfam MORN repeat 701 712 IPR003409 -
Tsu01g04965 740 Pfam MORN repeat 654 676 IPR003409 -
Tsu01g04965 740 Pfam MORN repeat 613 629 IPR003409 -
Tsu01g04965 740 Pfam MORN repeat 631 653 IPR003409 -
Tsu01g04965 740 Gene3D - 660 707 - -
Tsu01g04965 740 Gene3D - 610 659 - -
Tsu01g04965 740 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 19 550 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04965 66 739 PP2C-type Phosphatase Gene Family AT1G75010 47.536 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04965 - - gsj:114371951 1050.04