Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04947 ATGGGTGTAGGAATATCAGTATTAATAGCACTAAAAGCAACAACACTATTACTCATCTTCGCATACCTAAAAAAACTAGGGTTCATCATTTTATCCTTTCCATTCCTTTATGCATCCTTAATCTCTTTTCTAGTTTCAATCGCATCACATCCATCAATTGATCTTCCACTACTACTTGGCAAAACCTCCGATGGATCATTCCCAATCCTATCACTCATAATTTTCAGTCCTTATCTCTACTTCGTTCGAATTTTCTCTGCACTTCGAAGGCGAAAAAGCGGTGAACCACCTTATACGAAAGTTTATGATGGACTTTATGTTGGTGGTTGGCCTTCTTCGCCGGAAAAGATGCCGCCGGGTGATCCTGCTATTATTGATTGTACTTGTGAGTTTCCTAGGTTGAAAGGTTTTAGTGGTGGATTACCTTATATGTGTGTTCCTACTTGGGATACTAGATCGCCTCAACCCGGTGATATTGAACATGCTGTTAAATGGGCTTGTCGAAAAAGGGAGCTTAATAGACCTATTTTTGTTCATTGTGCTTATGGTCACGGAAGAAGTGTTGCTGTTATGTGCGCACTGTTAGTGGCACTAGGTATCTCTGAGGATTGGAAGAATGCTGAAAAGCTGATAAAACAAAAACGTCCTTACATTCGCATGAATGCTCTCCATCGCAAGGCACTTGAAGAATGGTCTGCAAACCGATTGTCTTCACCAAAGCCAAAGAAGTGA 732 0.4071 MGVGISVLIALKATTLLLIFAYLKKLGFIILSFPFLYASLISFLVSIASHPSIDLPLLLGKTSDGSFPILSLIIFSPYLYFVRIFSALRRRKSGEPPYTKVYDGLYVGGWPSSPEKMPPGDPAIIDCTCEFPRLKGFSGGLPYMCVPTWDTRSPQPGDIEHAVKWACRKRELNRPIFVHCAYGHGRSVAVMCALLVALGISEDWKNAEKLIKQKRPYIRMNALHRKALEEWSANRLSSPKPKK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04947 243 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 157 226 IPR000387 GO:0016311|GO:0016791
Tsu01g04947 243 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 233 IPR029021 -
Tsu01g04947 243 PANTHER - 3 240 - -
Tsu01g04947 243 Gene3D Protein tyrosine phosphatase superfamily 83 235 IPR029021 -
Tsu01g04947 243 SMART dsp_5 97 234 IPR020422 GO:0006470|GO:0008138
Tsu01g04947 243 Pfam Dual specificity phosphatase, catalytic domain 124 232 IPR000340 GO:0008138|GO:0016311
Tsu01g04947 243 CDD DSP_bac 94 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04947 141 239 Protein tyrosine phosphatase (PTP) family AT5G56610 31.000 8.31e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04947 - - aprc:113873203 429.483