Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04931 ATGggaaagaaaaatttgaaactaccttctctTTTCAAAACCAAAGAATCACAACCATGGAAATTCTTGCCATCTTGTAATCATCCAAAAACTGTTTCTTTTAGAACTGGCGTTGATGATGACATATTCAAAACAGTTAATTCTGTTTTTTTCGACCAAACTGAAAACAACATTATTGAAACACCAAAATCATGGTTCACAACATCATCAGAATCTGCAAGTTTCTCAACAGAATCAGAAGAATATTGTTTCTACAACGACGGCGAATCGTTAGAGACATTGGTTGCTGGAGTTAAGTCGAAGAGGTCATCGGAGAGACTGTTTTTCGAAGCAGAAGACACTAATTCGATATTGGAAAAGGCGAAAGCGGATAGTTTTCCGTTTAAAGAAAGTGTAGTGTTAGCTATGGAGTCAGATGATCCATATGAAGATTTTAAGAGATCAATGGAAGAAATGGTTGAGTCACATGGTGTGAAAGATTGGGAAGGTTTGGAAGAACTTTTGAGTTGGTATTTAAGAGTTAATGGTAAAAATAATCATGGTTTTATTATTGGTGCTTTTGTTGATTTGTTGATTAGTTTAGCAGTTACTAATAATGAAACTAATAACTCTTGTTCTTCTGATTTAACTTTATATTCTTCTGCTGTTTCTTCTTTTAGTTCTTCACCTTTGTACCTAAGTGAGGGACAAAATGAGATTACTGAGATTGAAGATAATAATGTAACAGCTTCTTAG 735 0.3265 MGKKNLKLPSLFKTKESQPWKFLPSCNHPKTVSFRTGVDDDIFKTVNSVFFDQTENNIIETPKSWFTTSSESASFSTESEEYCFYNDGESLETLVAGVKSKRSSERLFFEAEDTNSILEKAKADSFPFKESVVLAMESDDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIIGAFVDLLISLAVTNNETNNSCSSDLTLYSSAVSSFSSSPLYLSEGQNEITEIEDNNVTAS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04931 244 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 223 - -
Tsu01g04931 244 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Tsu01g04931 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 223 IPR038933 GO:0045892
Tsu01g04931 244 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
Tsu01g04931 244 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 132 195 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04931 Tsu-Chr1 56232932 56233743 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu01g04931 Ovate 7.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04931 - - mtr:MTR_1g111640 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04072 07 46653117 46654224 Tsu01g04931 01 56232932 56233743 ECH
Tsu01g04931 01 56232932 56233743 Tsu01g04931 01 56232932 56233743 ECH