Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04927 ATGGTGGTTGAAGGTGTTGGAAGCACTATGGGGTTATCAGAAAAGAAAAACCTCATAATCCAAGTCATCACGGGACGGTGGTTTGTGGTGTTTGCTTCCTTTCTAATCATGTCAGCTTCTGGAGCCACCTACATGTTTGGTCTATATTCTGGTACCATAAAACAAGCCTTAGGCTATGACCAAACAACTCTTAACCTTCTTAGTTTCTTCAAAGACTTGGGTGGTAACCTTGGTATTTTCTCTGGTTTAATCAATGAAATAACACCACCTTATGTTGTTCTTGCAATTGGTGCTAATTCTCAGTCTTTTTCAAATACTGGTTCACTCGTTACTTGTGTTAAGAATTTCCCCGAAACACGCGGCGTTGTTTTGGGGATTTTGAAAGGTTATGTTGGTCTTAGTGGTGCTATTATCACACAACTTTATTAtgctatttattttaatgatcCAAAAGCTTTGATTTTGCTCATTGCTTGGCTTCCAGCTGcaatttcctttctttttcttcgaaCCGTTCGATATATGAAACCGGTTAGACAGACCAATGAACTTAGTGTTTTCTATAAGTTTTTGTATACTTCACTTTCTCTAGCTggttttttattggttatgatcaTACTACAAAACAAATTGTCTTTTAAACAAAGTGAGTATATTGGAAGTGCTTCTATAGTGCTTATTTTATTGTTCCTACCTCTTGCCGTTGTTTTTGTTGAACAGAAAAAGATTTATACAAGTCAAAAACTTGCATTTGTCGATCCATTTTCGGTTAAAATAGTAACCGATCAAGGAGCGAAAAATGGTGAAAACAATGCAATGGTTAgtgttgaagaaaaagaaactagATGGTGGCAAAGTATTTTTAGTCCACCAGAAAAAGGTGAAGATTTTACAATACTTCAAGCACTTTTCAGCATAGACatgatattgttattttttgctGGTACTTGTGGTGTTGGTGGAACATTAACAGCAATTGATAATTTGGGTCAAATTGGAACATCACttggatatccaaaaaaaagtataagcaCATTTGTTTCATTAGTGAGTATTTGGAATTACCTAGGAAGAGTTTTCTCAGGTTTTGTTTCAGAACATGTTTtaacaaaatacaaatttcCAAGACCACTTATGTTAACATTAACTCTGTTTTTATCTTGTGTCGGTCACTTATTAATAGCCTTTGATGTTAAAAATGGTCTCTATTTTGCTTCAGTAAtcattggtttttgttttggtgcACAATGGCCATTAGTTTTTGCCATAATTTCGGAGTTATTTGGTTTGAAATATTATTCAACTTTGTACAACTTTGGTGGGGTAGCTAGTCCAATTGGACTATATTTTCTTAATGTTAGGGTCACTGGTCATTTATATGACAAAGAAGCTAAGAGACAATTGGTTGAAAGAGGAGTACCAAGAAAATTGGGTGAGGAATTGAATTGTGTTGGAGCAAGTTGTTACAAATTGTCTTTCATTATTATCACTGCAGCTACTTTGATTGGTGCCTTTGTTTCTCTTATTTTGGTGGCTAGAACTATTCAGTTTTATAAAGGTGATATATACAAGAGGTACCGATCCGAACCGGTGGAAGTTGAAGGCGATACGGCTGAGATGAAGGTTGTCCAAAATGGTGGTGAGAGAGTACAAGATGAAGCCAAAGCTACATAG 1674 0.328 MVVEGVGSTMGLSEKKNLIIQVITGRWFVVFASFLIMSASGATYMFGLYSGTIKQALGYDQTTLNLLSFFKDLGGNLGIFSGLINEITPPYVVLAIGANSQSFSNTGSLVTCVKNFPETRGVVLGILKGYVGLSGAIITQLYYAIYFNDPKALILLIAWLPAAISFLFLRTVRYMKPVRQTNELSVFYKFLYTSLSLAGFLLVMIILQNKLSFKQSEYIGSASIVLILLFLPLAVVFVEQKKIYTSQKLAFVDPFSVKIVTDQGAKNGENNAMVSVEEKETRWWQSIFSPPEKGEDFTILQALFSIDMILLFFAGTCGVGGTLTAIDNLGQIGTSLGYPKKSISTFVSLVSIWNYLGRVFSGFVSEHVLTKYKFPRPLMLTLTLFLSCVGHLLIAFDVKNGLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYFLNVRVTGHLYDKEAKRQLVERGVPRKLGEELNCVGASCYKLSFIIITAATLIGAFVSLILVARTIQFYKGDIYKRYRSEPVEVEGDTAEMKVVQNGGERVQDEAKAT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04927 557 PANTHER MFS TRANSPORTER 10 98 - -
Tsu01g04927 557 PANTHER MFS TRANSPORTER 95 552 - -
Tsu01g04927 557 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 98 - -
Tsu01g04927 557 Pfam Nodulin-like 92 237 IPR010658 -
Tsu01g04927 557 Gene3D MFS general substrate transporter like domains 303 518 IPR036259 -
Tsu01g04927 557 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 95 552 - -
Tsu01g04927 557 SUPERFAMILY MFS general substrate transporter 26 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04927 Tsu-Chr1 56199573 56201348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04927 1 529 Nodulin-like Gene Family AT2G39210 61.713 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04927 - - gmx:100808975 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04927 01 56199573 56201348 Tsu01g04927 01 56199573 56201348 ECH