Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04926 ATGGTAGGAGGTAGTTCAATTGGTGTTCAAGGTTGGGGAGACATGAAGAGTTTCACCGTCCAGTTTGTCACTGGACGGTGGTTCTTCGTGTTTGCCTCCTTTCTAGTCATTTTAACTGCGGGAACCACCTACATGTTCGGCTTATACTCCAGCGACATAAAAACAGCACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTACCAACGTTGGTGTCATTTCAGGACTAATCAATGAAATTTATCCACCTTGGGTAGTTTTAGCAATAGGTGCTAATTCTACATCTTTTGCAAACACCGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTACTATGCTATTTATTATGATGATACAAAggctttgattttgtttataagTTGGCTCCCTGCTGCTATTACTTTTGCTTTTCTTCCCACCATTCGATATATGAAACCTGTTCGACAAGTTAACGAACTTAagAGTGAGTTTGGTGTAAGTGCTGCTGTGGTAATTATCTGCCTTTTTCTTCCACTTATTGTTGTTTTTAACGAAGAGAACAAGATTTGGCAGAATAAAAAATTAGCTTTGGTTGATCCTTCACCTGTGAAAATAGTAACACaaactgaaaaagaaaaagtcagCCCTGTTGTTTCAGATTCAGCGCCAAAAAAAGATCCGAAATGGTATGAAGATGTGTTTAATCCACCGGAAAGAGGTGAGGATTATACAATACTACAAGCACTTTTCAGCATAGACATGTTGATACTAATTGTAGCATGTATTTTTGGTGTTGGTGGAACATTGACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATTCAAAGAAAAGTATAAGCACTTTTGTGTCAGTAGTAAGTATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTATCGATTTCCTCGTCCTCTTATGCTTAGTTTAACACTCTTTGTCTCTTGTTTTGGACATCTTTTGATAGCATTTGATGTTAAAAATGGTCTCTACATAGCTTCAGTGATTATTGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCTATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTCGGAAGTGTTGCATGTCCACTTGGGTTATATGTTCTTAATGTGAGAATCACTGGTCATTATTATGACAAAGAAGGTACAAAACAATTAGAAGCACTTGGACTAAAGAGAAAAGAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATTATTACAGCTGCTACATTGTTTGGTGCTGTTTTTTCACTTCTTTTGGTGGTTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATACAGAGAAGAAGCTTTGGTGACAGAAGCTGAAATGTTGGAGAAAAAGACATTTCAAAAAGTGTAG 1551 0.354 MVGGSSIGVQGWGDMKSFTVQFVTGRWFFVFASFLVILTAGTTYMFGLYSSDIKTALGYDQSTLNLLSFFKDFGTNVGVISGLINEIYPPWVVLAIGANSTSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYYAIYYDDTKALILFISWLPAAITFAFLPTIRYMKPVRQVNELKSEFGVSAAVVIICLFLPLIVVFNEENKIWQNKKLALVDPSPVKIVTQTEKEKVSPVVSDSAPKKDPKWYEDVFNPPERGEDYTILQALFSIDMLILIVACIFGVGGTLTAIDNLGQIGTSLRYSKKSISTFVSVVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLSLTLFVSCFGHLLIAFDVKNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVACPLGLYVLNVRITGHYYDKEGTKQLEALGLKRKEGQQLNCVGVDCFKLSFIIITAATLFGAVFSLLLVVRTRKFYKGDIYKRYREEALVTEAEMLEKKTFQKV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04926 516 PANTHER MFS TRANSPORTER 95 185 - -
Tsu01g04926 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 95 185 - -
Tsu01g04926 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 98 - -
Tsu01g04926 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 185 514 - -
Tsu01g04926 516 Pfam Nodulin-like 95 206 IPR010658 -
Tsu01g04926 516 SUPERFAMILY MFS general substrate transporter 25 487 IPR036259 -
Tsu01g04926 516 PANTHER MFS TRANSPORTER 9 98 - -
Tsu01g04926 516 PANTHER MFS TRANSPORTER 185 514 - -
Tsu01g04926 516 Gene3D MFS general substrate transporter like domains 271 489 IPR036259 -
Tsu01g04926 516 CDD MFS_Mch1p_like 25 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04926 Tsu-Chr1 56192498 56194240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04926 13 499 Nodulin-like Gene Family AT2G39210 60.823 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04926 - - pvu:PHAVU_007G024800g 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04926 01 56192498 56194240 Tsu01g04926 01 56192498 56194240 ECH