Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04925 ATGGCACTAGGTAGTTCAATTGGTGTTCATGGTTGGGGAGACATGAAGAGTCTCACCGTCCAGTTTGTCACTGGACGGTGGTTTGTCGTGTTTGCCTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCTTATACTCCGGCGATATAAAAACAGCACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAACGTTGGTGTCCTATCAGGACTAATCAATGAACTCTATCCACCTTGGGTAGTTTTAACAATAGGTGCTATTCTCAATTTCTTTGGTTACTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTGTATAGGTGCTAATTCCCAATCTTTTGCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTACTCCGCTATTTATTATGATGACACAAAggctttgattttgtttatagGTTGGCTACCTGCTGCTATTTCTTTCGCTTTTCTTCGTACCATTCGATATATGAAACCTGTTCGACAAGTTAAAGAGCTTAaggttttttataatttcttgtatatttcACTTGGTCTTGCTGGATTCTTGTTGGTTATGATCATAATTCAAAAGAAGGTTAGTTTCTCACAAAGTGAATTTGGTGTAAGTGCTGCTGTGGTAATTTTCTTGCTTTTTCTTCCGCTAGCTGTTGTTTTTATTGAAGAGAACAAGGTTTGGCAGAGTAAAAAATTTGCTTTGGTTGATCCTTCACCGGTGAAAATAGTAACACAAAGTGAAACTGTTACTGaaactgaaaaagaaaaagtcaacTCTGTTGTTTCAGCTccaaaaaaagatacaaaatgGTATGAAGATGTGTTCAATCCACCAGCAAGAGGTGAGGATTATACAATACTGCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGTGGAACATTGACAGCAATTGATAATCTTGGTCAAATAGGAACATCACTAAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCATTAGTAAGTATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTATCGATTTCCTCGTCCTCTTATGCTTACTTTAACACTCTTTGTCTCTTGTATTGGACATCTTTTGATAGCATTTGATGTTAAAAATGGTCTCTACATAGCTTCTGTGATTATTGGCTTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTAGCAAGTCCACTTGGGTTATATGTTCTTAATGTGAAGATCACTGGTCATTTATATGACAAAGAAGGTACAAGACAATTAGAAGCACTTGGAAAACATAGAATAAAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATTATCACAGCTGCTACATTTTTTGGTGCTGTATTTTCACTTCTTTTGGTGGCTAGAACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTTAGAGAAGAAGCTATGGTGACAGAAGCTGAAATGTTGGAGAAAAAGAACATGGGAAAGACAGAAGAAGATGCCAAAGTTGGGGAGCAACATGTGGTGACAACTTAG 1797 0.3539 MALGSSIGVHGWGDMKSLTVQFVTGRWFVVFASFLIMAAAGATYMFGLYSGDIKTALGYDQSTLNLLSFFKDFGSNVGVLSGLINELYPPWVVLTIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQVKELKVFYNFLYISLGLAGFLLVMIIIQKKVSFSQSEFGVSAAVVIFLLFLPLAVVFIEENKVWQSKKFALVDPSPVKIVTQSETVTETEKEKVNSVVSAPKKDTKWYEDVFNPPARGEDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTLFVSCIGHLLIAFDVKNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEGTRQLEALGKHRIKGQQLNCVGVDCFKLSFIIITAATFFGAVFSLLLVARTRKFYKGDIYKRFREEAMVTEAEMLEKKNMGKTEEDAKVGEQHVVTT 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04925 598 SUPERFAMILY MFS general substrate transporter 25 555 IPR036259 -
Tsu01g04925 598 Pfam Nodulin-like 26 271 IPR010658 -
Tsu01g04925 598 CDD MFS_Mch1p_like 25 542 - -
Tsu01g04925 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 598 - -
Tsu01g04925 598 Gene3D MFS general substrate transporter like domains 337 557 IPR036259 -
Tsu01g04925 598 PANTHER MFS TRANSPORTER 9 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04925 Tsu-Chr1 56187186 56189297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04925 13 567 Nodulin-like Gene Family AT2G39210 71.786 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04925 - - pvu:PHAVU_007G024800g 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03913 07 45274669 45276513 Tsu01g04925 01 56187186 56189297 ECH
Tsu01g04925 01 56187186 56189297 Tsu01g04925 01 56187186 56189297 ECH