Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04861 ATGAACAGAAAAAGCCCTTTGTTTATCCTCAAGCCCTTCTCTTCTCCCCTGATTTATTCATACATCACCCTCTTCTATTTCCTCATCAGAACCACTCTATGCTTTGTAGAACCAAAATTTGAAGCTTGTGAACCCATAACATGTGGCAACAACCAAACTATAAGATACCCTTTCTACATCAAAGGAAAACAACAACCTTTTTGTGGCTACCCTGGTTTTGGTATCTCTTGTGACACTAATCTTGGTTTTCCAATCCTTAATCTTTCCAATACGTTATACATAATCGACgaaattttctatcaaaatCAATCATTAAGAGTTTCCAATGCTGTTTTTTCAAGATCAAACATCAACAAAGGTTGTCTTTCACCCAGCCACAACCTCAGTTTTCCTATGAACATGTACAATCTTGCACATAACCAAACCCTAGTAATTTTGTTCTTTGGATGCGACTCAACAAAGCTACCCAGAACGCTGCAAAGGAACAGAATTGGTTGCTCTGCAGAAAATGAAACGAGTTCAGTTGTGGCATTATATGAGGATGATAAAAATGCAAGCTTTGTGTCAAATAATTGCAGGGGTGGGGTGGTGAATGCGATGGTGGGAAATGGTGTGAAAGGAGGGATTGAAGAGTCGCTGAGAAATGGGTTTCGGTTGAATTGGATAGCTAGTGATTGTAGTGTGTGTTATAACAGTGGAGGAAGGTGCGGTTTTAATTCATCCATATATAGTTTCAGATGTTACTGCCCTGACAGTGTTCATGCTGCAAGATGTGATCCAGTAGGCACTGCACTGGTATATTTTGGACTACAATCGACATTTGGCCTTTTTGCCTGTGCTGTGAGCCGAGTTGATCTTGCTCCAAGCGAGGGCATGTCTGTCCATGCAGGTTCAATTTTCTCTACAAGCTCGAAGCCGTGGCAAGGTCCTTTTCTATGTTGTGATTGTCAGAATAAGAAGGATGGAATGGAAGGAAAACGTCCAAGTGGAGTTAAAGTGTCATAG 1005 0.405 MNRKSPLFILKPFSSPLIYSYITLFYFLIRTTLCFVEPKFEACEPITCGNNQTIRYPFYIKGKQQPFCGYPGFGISCDTNLGFPILNLSNTLYIIDEIFYQNQSLRVSNAVFSRSNINKGCLSPSHNLSFPMNMYNLAHNQTLVILFFGCDSTKLPRTLQRNRIGCSAENETSSVVALYEDDKNASFVSNNCRGGVVNAMVGNGVKGGIEESLRNGFRLNWIASDCSVCYNSGGRCGFNSSIYSFRCYCPDSVHAARCDPVGTALVYFGLQSTFGLFACAVSRVDLAPSEGMSVHAGSIFSTSSKPWQGPFLCCDCQNKKDGMEGKRPSGVKVS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04861 334 Pfam Wall-associated receptor kinase galacturonan-binding 43 108 IPR025287 GO:0030247
Tsu01g04861 334 Pfam Wall-associated receptor kinase C-terminal 173 251 IPR032872 -
Tsu01g04861 334 PANTHER OS01G0690200 PROTEIN 16 260 - -
Tsu01g04861 334 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 16 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04861 Tsu-Chr1 55618087 55624472 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04861 275 333 PP2C-type Phosphatase Gene Family AT1G68410 79.661 6.37e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04861 - - cam:105851067 358.607