Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04831 ATGGAGAAAGTTTGTGAATTCTGCACAGCACTGAGGCCACTTGTTTACTGTAATGCTGATGCAGCATATCTTTGTCTATCTTGCGACGCAAAGGTTCATTGGGCAAATGAATTGTCTGGCCGGCACATCCGGACCCTTGTGTGTAACTCGTGCAGATGCGATCTTGCTTATTTTCAGTGCTTGGATCACAAAATGTTAATATGTCGAGACTGTGATCAAAAGTTGCACGATAGTTCTTCACCGCATCGCAAACGAGCTGTCAAAACTTTCATCGGCTGCCCTTCTGCCAAAGAATTTGCAGCACTTTGGGGATTTGAATTTAAGGAGATTGAAAAGAGTGTTATCAGTCGGAAGGATCCGTTTGCAGTTGCGTCTATTTCTTCTGTTTCTACGGATGTGAATGTGATCAAGCATCATCGCATTCAAACTAGGATCGCTTCGACAGCATCTGCAGCTAAACTTGATAAGGGATCCAGCAGTCAACAAGGTCAGATATTGTACAGTGATCAAGAGCGGCAAACTATTCTGCAGCAGATTGTTGATTTAAAACGGTTTCAGCTAAATGAGGAGATTCATCATTCTACAAAGGTAAATGGATTACAAGTGGATGACAAATTCAATCAACAAGGACAAAATTCCCACAATTTTGCTACTGATCTTCTGGGAGAAGACAATCCCGAAACTTTCTCTTCTGCGTTTTCTCAACTTGATAATTTGTCTTCATCTTCAACTATGGACCTTCCTTTGCATGGAGAGTTATTTTGGACTTGTAAAAGCTCATTTCAAAGTAATCAGGTTAGAACCATGTAA 810 0.4099 MEKVCEFCTALRPLVYCNADAAYLCLSCDAKVHWANELSGRHIRTLVCNSCRCDLAYFQCLDHKMLICRDCDQKLHDSSSPHRKRAVKTFIGCPSAKEFAALWGFEFKEIEKSVISRKDPFAVASISSVSTDVNVIKHHRIQTRIASTASAAKLDKGSSSQQGQILYSDQERQTILQQIVDLKRFQLNEEIHHSTKVNGLQVDDKFNQQGQNSHNFATDLLGEDNPETFSSAFSQLDNLSSSSTMDLPLHGELFWTCKSSFQSNQVRTM 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04831 269 CDD Bbox1_BBX-like 4 47 - -
Tsu01g04831 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 266 - -
Tsu01g04831 269 SMART bboxneu5 1 47 IPR000315 GO:0008270
Tsu01g04831 269 SMART bboxneu5 48 87 IPR000315 GO:0008270
Tsu01g04831 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 266 - -
Tsu01g04831 269 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04831 Tsu-Chr1 55334171 55337111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04831 1 264 C2C2-CO-like Transcription Factor Family AT1G68190 34.815 1.71e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04831 - - cam:101505436 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04831 01 55334171 55337111 Tsu01g04831 01 55334171 55337111 ECH