Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04798 ATGATGAAGCTCAATGCTCAGCTGACTCAAATCAATAACACGCTGGACGACGTGAAGAAGCATGGTGATGAGCTAACCCGTTTGCACAAGGAGATGAATGCTTTATTTTGGTGGGCTTGTCCAATTGGTGGGATGAATAGGGTTGAACTTGAATTCCTAAGTAAGGCTTTGAAAGAGCTTAAGAATCTTGTTGCACAAAATGTTGTTGGAATTGCAATTCAGGATGCGCCTAGTCAAACTCTCCCATTTTTTGTTGGCAATGCTTCATCCTCTAACACCCCTCTCTGTATGTTAAATCCTCAAAAGGCTCAAATGTTTCCACCACAACTTCCTCAAAATCCTATGTTGCAATCTAATTTGTTTGGCTACAACAATATAGGAGGAGGAGGATATGGAATTCCTGGATTCTTTTGA 414 0.4082 MMKLNAQLTQINNTLDDVKKHGDELTRLHKEMNALFWWACPIGGMNRVELEFLSKALKELKNLVAQNVVGIAIQDAPSQTLPFFVGNASSSNTPLCMLNPQKAQMFPPQLPQNPMLQSNLFGYNNIGGGGYGIPGFF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04798 137 Coils Coil 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04798 Tsu-Chr1 54996792 54997205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04798 3 70 Type I MADS-box Gene Family AT2G24840 33.803 1.30e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04798 - K00853 mtr:MTR_1g105905 122.094