Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04797 ATGCAAATCATTGAGGCTCGCCGCAACCCTAACGTGAATGAGCTCAACGCTCAACTAACGCAAATCAACAACACGCTAGACGATGTGAAGAAGCATGGTGATGAGTTGAGACATTTGCACAAGGAGATCAAGGCTTTATTTTGGTGGGCTTGTCCAATTGGTGGGATGAATAGAGTTGAACTTGAATTCCTAAAGAAGGCTTTGAAGGAGCTTAAGAATCTTGTTGCACAACATGTTATTGGGATTACAATTCAGGACACTCCTACTCAGATTCATCCATTTTTTGTTGGCAATGCTTCGTCCTCTAATATTCCTCAACAAGCTCAAATGTTTCCACCACAACTTCCTCAAAATCCTATGTTGCAATCTAATTTGTTTGGTTACAACCATATAGAAGGAGGAGGATATGCAAATCCTGGATTCTTTTGA 429 0.4056 MQIIEARRNPNVNELNAQLTQINNTLDDVKKHGDELRHLHKEIKALFWWACPIGGMNRVELEFLKKALKELKNLVAQHVIGITIQDTPTQIHPFFVGNASSSNIPQQAQMFPPQLPQNPMLQSNLFGYNHIEGGGYANPGFF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04797 142 Coils Coil 12 32 - -
Tsu01g04797 142 Gene3D - 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04797 Tsu-Chr1 54993702 54994130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04797 1 129 Type I MADS-box Gene Family AT5G60440 32.593 7.24e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04797 - K07700 mtr:MTR_1g105905 147.902