Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04781 ATGTCGAGTGGAAGGAAAGTTCAAGGACGCCAAAAGATCGAGATGAAAAAGATGAGCAACGAGGGCAATCTACAAGTGACTTTCTCAAGCGTCGTAGCGGGCTCTTCAAGAAAGCTAGTTGCAGTTCTTGCCTTGATCTTTGAGGTACAAAGAAGTGCTAGATCTGAAGCACGGAAGGAGGAAATACGAAAGCTAGAGCTAGAGGCTGTGAGGCAAAAAAATGATGGTTTGGCAGAAGAAATAGAACTTCTTAAGCATAGACTTGAAGAACTGGAACAGCTGGCCCGGGGACGAGGACTCACTGGCAGGCATTCTAAATTTGAAATGCTCTTCAAGGACAAGGCAAAGAACCATGTTGATGATCTGCAGGTGATGTTTCTTGATCTGCAGTTTGCCAGGAAGGAGAGTCGTTCCATTGATGCCGCACTTCTTGAGGAGCAAGTCAATCAGATGCTTCTGGAGTGGAGGGCCGGTCTAAATGAGCCCTCTTCTGCTGCTTCCTTAAAGCTCAGAACAATCCTCCTTAATGAAGGCAGTCATGGATCATTCTCAACCGATATTTGTAGGCTATTTCAGCTCTGTGAGCATGAAGATGATGCCACTAGTCTATTAGCTGTGCCTCGGCATGAACCTAATGATCAGACTATGCAGACTGATGCTATGGTGATATTTCAAGAGGATAATTTACTTTTAGCTTCTCTTAGTGCAAAGGCAGAAGGAAAAGATGTTGGCATCCTGGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAGTTCTTTGATCTTTTTGTTCTCGAGGGTGAGACTATTAGGGAGTGGCTTTCTTTGATAAGTCTCGAAGGGCATTTGAGAGTGGAAACAGAAAGCAAAGAATTAAAGCGTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGATAACAAGTGATTCTGTTACTAATCTGCAGAAGCGGATAGGAAGACTCTCTGCCGAGTTTCCCTATGATAGCAGACGTTCTGCAAAGGGCAGAGCCAAACCTGATGCCAAGGCTGACATAGGAGATCAATTCATTAATGCAAGAATAATGAGCGGAGATTTGAAAGTAGGAGTAGAGGTTTCGAAAAATGAAGATGGACTGTTTACTAGGGAAGCTGTGTGCAACGCAGTGAGAGTTGTAATGGACACTGAGAGTGAATTGGGTCAAACGGTGAGAACCAATCATGCTAAATGGAGGGAGTTCTTGCTCAGTCAAGGGCTGGAAAACTCCTACGTGGATGATTTGGTTCAGAAGCTGGACAGTTTGCTCAAGTCTTGA 1302 0.447 MSSGRKVQGRQKIEMKKMSNEGNLQVTFSSVVAGSSRKLVAVLALIFEVQRSARSEARKEEIRKLELEAVRQKNDGLAEEIELLKHRLEELEQLARGRGLTGRHSKFEMLFKDKAKNHVDDLQVMFLDLQFARKESRSIDAALLEEQVNQMLLEWRAGLNEPSSAASLKLRTILLNEGSHGSFSTDICRLFQLCEHEDDATSLLAVPRHEPNDQTMQTDAMVIFQEDNLLLASLSAKAEGKDVGILECEGAATAKSPWNAPEFFDLFVLEGETIREWLSLISLEGHLRVETESKELKRVDGKKSSKAKITSDSVTNLQKRIGRLSAEFPYDSRRSAKGRAKPDAKADIGDQFINARIMSGDLKVGVEVSKNEDGLFTREAVCNAVRVVMDTESELGQTVRTNHAKWREFLLSQGLENSYVDDLVQKLDSLLKS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 105 225 IPR039277 GO:0006355|GO:0048578
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 105 225 - -
Tsu01g04781 433 ProSiteProfiles MADS-box domain profile. 8 45 IPR002100 GO:0003677|GO:0046983
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 227 278 IPR039277 GO:0006355|GO:0048578
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 295 350 IPR039277 GO:0006355|GO:0048578
Tsu01g04781 433 Coils Coil 55 94 - -
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 227 278 - -
Tsu01g04781 433 PANTHER TRANSCRIPTION FACTOR VOZ1 295 350 - -
Tsu01g04781 433 Gene3D Glycogen Phosphorylase B; 349 408 - -
Tsu01g04781 433 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 349 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04781 Tsu-Chr1 54920647 54925050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04781 226 369 VOZ-9 Transcription Factor Family AT1G28520 37.736 2.03e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04781 - - gmx:100806521 161.77