Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04765 ATGGATCCAGCGCCCGGTGATGCGTCTAATCCACCTCCTCTGAAAATACCATCTACGGCACCTCCTGCTAAAGAGGATGATGGTCAAGATTCTGCTGCTGTAGCATCTGGACAAGATAATACTGCCCGTGAAGCACCATCTAGGCTATCTCCTACCGGCATATCTTCTTGGgccaaaaatttaaaactttctCAGTCATTTTCTGGTAACCAAGATGATTCTTCAAGTGAAAATCTTGCAAAATCAACGTTTGCACGCTTTACAAGTAATCTGGGATTGCGGTTGTCTCCAAAACCTCCTGTGGTAGATGACAATTCCAACGAACCGGAAGCACAATCTAATCTGTTTGGAACTATCACAAAAGGTCTGGTAGACTCTTCGAAGAATGCGGTGAAAGCTGTGCAGGTCAAAGCGCGGCACGTTGTTTCTCAAAATAAACGCAGATACCAGgaGGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATTATTGCAATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTTGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAGACTCACCACAAGGATAAATACAAAGTATATAATCTTTGTTTGGAGCGCCTGTATGATGCATCATTGTTCGAGGGGAAGGTTGCTAGCTTCCCATTTGATCGACCATAA 705 0.417 MDPAPGDASNPPPLKIPSTAPPAKEDDGQDSAAVASGQDNTAREAPSRLSPTGISSWAKNLKLSQSFSGNQDDSSSENLAKSTFARFTSNLGLRLSPKPPVVDDNSNEPEAQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCLERLYDASLFEGKVASFPFDRP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04765 234 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 19 233 - -
Tsu01g04765 234 MobiDBLite consensus disorder prediction 1 19 - -
Tsu01g04765 234 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 231 IPR029021 -
Tsu01g04765 234 ProSiteProfiles Phosphatase tensin-type domain profile. 147 234 IPR029023 -
Tsu01g04765 234 MobiDBLite consensus disorder prediction 1 54 - -
Tsu01g04765 234 Gene3D Protein tyrosine phosphatase superfamily 132 233 IPR029021 -
Tsu01g04765 234 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 19 233 - -
Tsu01g04765 234 MobiDBLite consensus disorder prediction 33 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04765 Tsu-Chr1 54787822 54790554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04765 33 232 Protein tyrosine phosphatase (PTP) family AT3G19420 71.921 1.45e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04765 K01110 - gmx:100799214 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04765 01 54787822 54790554 Tsu01g04765 01 54787822 54790554 ECH
Tsu05g00584 05 4817662 4824494 Tsu01g04765 01 54787822 54790554 PCT