Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04684 ATGATGGGTGAAGAGAGGGTAGTGAGGCGACAAATTGGTAGGAAAGGAAGTATGGCGAGAACATGGCTGATGATGAGCATTGAGGGGCAGAGACAGATGGTAGAGGCAGGGAGACAGTCGATAATGCGGCGGACAGGGCTAACAGCTAGGGACCTTAGGAGTCTTGATCCAATGTTATCTTACCCTTCAACAATTGTGGGGCGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAGGCTATCATTACTGCTCATGAGGTTTTTCTGCTCAATTCTAGAGATCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCAAGGATTATTGATCATCACAGTACTGCTACTACTGATCATTCTAAGGAGGGTCAAAATGGGAAGGATAAAGGTGAAATAAAGAGAGATAGCAGCAACAATGTGAAGATTCTTCCGTTTGAATTTGTTGTATTGGAGGCATGCCTTGAAGCTGTTATTAGTTCCTTAGAAAATGAGGCAAATATATTGGAATTGGAGGCTTTCCCAGCCTTAGATAAGCTAACATCAAAGATTAGTACTCTTAATTTGGAACGTGTTCGTCATATTAAGAGTCGATTGGTTGCCTTAACTTCTCGTGCTCAAAAGGTAAGGGATGAACTGGAAAACTTGTTGGATGATGAGGGAGATATGGCTGAGCTATATCTCACAGATAAGTTGGCTCAACAGAAGTTAGAAATTTTTTCTGCTACTTCATCCATGAGTAATAATGGGGATGACATGAAGACGAATcaagttcttcaacaagatATAGTTGACAGGACACATCCTgaaatatcattggaacaagatgAAGATTTAATTGATCACGAACATTATGAAAATGTTGTTGGTGGTGAAGTCTCTGGAACCCAAGCTGCTACTGTCGATAGTGGTGCACCTAATGTTCAGGAGCTCGAGATGCTTTTAGGGGCATACTTTGTGCAAATTGGAGCGACATTGAACAAATTATCTGCGCTAGCTGAATATGTCGAGGACACGGAGGACTACATAAACATAACATTGGACGACAAACAGAACCGTATTCTGCAAGCAGGAGTTCAGATAGGCACTGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGCGCATACTGTAATACTTCGCTAGGAGCAGAATCTCTTGACTAG 1170 0.4026 MMGEERVVRRQIGRKGSMARTWLMMSIEGQRQMVEAGRQSIMRRTGLTARDLRSLDPMLSYPSTIVGRDKAMVLNLEQIKAIITAHEVFLLNSRDPSVIPFVDELHARIIDHHSTATTDHSKEGQNGKDKGEIKRDSSNNVKILPFEFVVLEACLEAVISSLENEANILELEAFPALDKLTSKISTLNLERVRHIKSRLVALTSRAQKVRDELENLLDDEGDMAELYLTDKLAQQKLEIFSATSSMSNNGDDMKTNQVLQQDIVDRTHPEISLEQDEDLIDHEHYENVVGGEVSGTQAATVDSGAPNVQELEMLLGAYFVQIGATLNKLSALAEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGAYCNTSLGAESLD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04684 389 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 378 IPR039204 -
Tsu01g04684 389 Coils Coil 152 172 - -
Tsu01g04684 389 CDD Mrs2_Mfm1p-like 22 378 IPR039204 -
Tsu01g04684 389 Coils Coil 199 219 - -
Tsu01g04684 389 Gene3D Magnesium transport protein CorA, transmembrane region 100 354 - -
Tsu01g04684 389 PANTHER MAGNESIUM TRANSPORTER MRS2-3 14 378 - -
Tsu01g04684 389 Gene3D - 6 93 - -
Tsu01g04684 389 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04684 Tsu-Chr1 54172823 54175176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04684 21 378 MRS2 Gene Family AT3G19640 54.177 1.04e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04684 - - aprc:113872466 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04684 01 54172823 54175176 Tsu01g04684 01 54172823 54175176 ECH