Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu01g04612 | ATGATATCCATGgatgaagaagagaagaaactaaaccaacaacaacacacCAAAACACTCATTGCTGCTCTCAACTTTCTCTCTCGCGACGTTCCTCTTCCTTCTCATCTTCTCAACTCCGTTTCTTCCATCTATCATCACAATAACAATGGCGATGTAGGGAATTCTGGAGATGATTTAATAACAGATCTTGAAGATGCATTATCAGAACAGCGTACAAAATGTGCATCAGGTTTCAAGTTGGAGGAAGCGATGGAAAGCCGTCATCAAAGTCAGATTCGGCATCGGTTAAATGAGCTTGAAGAATTGCCTTCAAGCAGGGGAGAGGACCTGCAGACAAAGTGCCTGCTTGAACTTTATGGACTGAAGTTAGCAGAGTTGCAGTCAAAGGTTCGGTCTGATGTGAGTTCTGAATACTGGCTCAATGTTGAATGTGCATATCCTGACAGGAAATTGTTTGATTGGGGAATGATGAGATTGCGCCGTCCATCGTATGGAGTTGGAGATCCATTTGCCATGGATGCTGATGATCGATTAAGGAAGAAACGGGATTCTGAGAGACTGTCAAGATTAGAAGAGGTGGAGAAAAATCAAATAGAGACTACAAAAAGAAGGTTTTTTGCTGAAGTACTAAATTCTGTCCGCGAGATGCAATTACAAATTCAAGCTTCTTTGAAGCGGAGAAAACAGAGGAATGATGGTATCCAGGCATGGCATGGAAGGCAAAGACAAAGGGCAACCCGAGCAGAGAAATTGAGATTCCAAGCCTTGAAGTCCGATGATCAAGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACTTTGCTTCTTGAAGAAACAAATAAACTACTGGTAAATTTAGGAGCAGCCGTTCAACGTCAGAAGGACTTCAAACATTCAGATGGTATTGAACCCTTGGAAGATTCCGAAGCTGATTTACCCGAGTCAGATGCTTCAAAGAATGGAATTTCTAAGGAATCACCTGTTGATGAAGATATAGATGCGATAGATTCTGATCATAATGATGGGGATTCTAACGATTTACTTGAAGGTCAGCGACAATACAATTCTGCCATACATTCAATTCAGGAAAAGGTAACTGAGCAACCGTCTATACTTCAAGGTGGAGAATTAAGATCATATCAGATAGAGGGGCTCCAATGGATGCTTTCTTTGTTTAATAACAACTTAAATGGGATTTTAGCTGATGAAATGGGGCTTGGGAAAACAATACAAACAATTTCCCTCATAGCACATCTTTATGAATACAAAGGTGTGACTGGGCCCCACTTGATTGTTGCTCCAAAGGCAGTTCTGCCGAACTGGATTATTGAATTCTCAACGTGGGCTCCTAGCATTAAAACTATTCTTTATGATGGACGGATGGACGAGAGAAAAGCAATAAAGGAAGAATATTCAGGAGAGGGGAAATTTAATGTTATGATTACACATTATGATCTTATAATGAGAGACAAAGCATTTCTGAAGAAAATTAAATGGAACTACTTAATTGTGGATGAAGGTCATCGGTTGAAGAATCATGAGTCTGTTCTAGCAAAAACATTGGACAATAGCTATAACATCCAACGGAGACTTTTGTTGACTGGTACCCCAATTCAAAACAGTTTGCAGGAACTATGGTCCCTGCTTAATTTTCTCCTTCCAAACATTTTTAACTCCGTTCAAAATTTCGAGGACTGGTTCAATGCCCCCTTTGCAGACCGAGTTGATGTCTCTCTATCAGATGAAGAACAGCTATTAATCATTCGGCGTCTGCATCAAGTAATTAGGCCCTTCATATTAAGAAGGAAAAAGAATGAGGTGGAAAAATTTCTTCCCGGGAAATCTCAGGTCATACTCAAATGTGATATGTCAGCCTGGCAGAAAGTTTATTATCAACAAGTTACTGATGTAGGCAGAGTTGGTTTGGACAACGGTACTGGAAAATCGAAAAGTCTACAGAACTTAACGATGCAACTCAGAAAGTGTTGTAACCATCCTTACCTCTTTGTGGGAGACTATGATATGTATAGATGTAAGGAGGAGATTGTCAGAGCATCAGGTAAGTTTGAACTCCTTGACCGTTTGCTCCCAAAACTTCGCAGAGCTGGTCACCGAGTCCTCCTTTTCTCACAAATGACTCGACTCATGGACACTCTTGAAGTTTATTTAAGACTTCATGATTTTAAGTATCTTAGACTTGATGGCTCAACGAAAACTGAAGAAAGAGGCACTCTACTACGGAAATTTAATGCCCCCGACTCCCCATACTTTATGTTTCTCTTAAGCACCCGGGCTGGTGGTCTTGGTTTGAACTTGCAAACAGCAGATACTGTTATAATCTTTGACAGCGATTGGAACCCACAAATGGATCAACAAGCCGAGGACCGAGCACATCGAATTGGACAAAAAAAGGAAGTTCGGGTTTTTGTGTTGGTTAGTGTGGGATCAATTGAAGAGGTGATTTTGGAGCGTGCAAAACAAAAGATGGGTATAGATGCCAAAGTCATTCAGGCAGGACTTTTCAATACAACGTCAACAGCCCAGGACAGACGAGAAATGTTGGAGGTGATTATGCGTCGAGGTTCAAGCTCACTTGGGGCAGATGTGCCTAGTGAAAGAGAAATTAACCGCCTTGCTGCTCGATCAGATGAGGAATTTTGGATGTTCGAGAAAATGGATGAAGAAAGAAGACAAAAGGAAAACTACAAATCACGTCTCATGGAAGAGCGTGAATTGCCAGATTGGGTATATGCTCCAATTCAAAAGGATGACAAGTCCAAAAATTTCAACAGTGGTGTTACTGGAAAGCGGAAAAGAAAAGATGTGGTATATGCTGATACATTGAGTGAATTACAATGGATGAAAGCTATGGAGAATGGGGAGGATATGTCAAAGCTTTCAGCTAAAGGGAAAAGAAGAGAGTCAAGAGACTACCTCTCATCTGACAGCATAGCACGAGCCAGCGATGATACAGGGGCAGTTGACAGCTTATTAGAGTCAAGGACTAAAATTGCCCCCACGGCAAATGAGAGAACGAGTGAAGACAGTTTCCATGTTACTCCTTCCTCAAAGAGATTCAAACCTGACAGAACAAATTTCCAGAAACATGCGCACGAAGATGTCAGTGGAAGTGGTTTGAACCAGCATGTTTTCTCCTGGAATACTCACAAAAAGAAGAGATCAAGCCATCCTGGCCAGGGTTCAGTATCCGATAGCAGAGGGCAGAATTCAAATGGAAGAGCAAACTGGAACTGA | 3270 | 0.4083 | MISMDEEEKKLNQQQHTKTLIAALNFLSRDVPLPSHLLNSVSSIYHHNNNGDVGNSGDDLITDLEDALSEQRTKCASGFKLEEAMESRHQSQIRHRLNELEELPSSRGEDLQTKCLLELYGLKLAELQSKVRSDVSSEYWLNVECAYPDRKLFDWGMMRLRRPSYGVGDPFAMDADDRLRKKRDSERLSRLEEVEKNQIETTKRRFFAEVLNSVREMQLQIQASLKRRKQRNDGIQAWHGRQRQRATRAEKLRFQALKSDDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQKDFKHSDGIEPLEDSEADLPESDASKNGISKESPVDEDIDAIDSDHNDGDSNDLLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLYEYKGVTGPHLIVAPKAVLPNWIIEFSTWAPSIKTILYDGRMDERKAIKEEYSGEGKFNVMITHYDLIMRDKAFLKKIKWNYLIVDEGHRLKNHESVLAKTLDNSYNIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLSDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGTGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRCKEEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDTLEVYLRLHDFKYLRLDGSTKTEERGTLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEVIMRRGSSSLGADVPSEREINRLAARSDEEFWMFEKMDEERRQKENYKSRLMEERELPDWVYAPIQKDDKSKNFNSGVTGKRKRKDVVYADTLSELQWMKAMENGEDMSKLSAKGKRRESRDYLSSDSIARASDDTGAVDSLLESRTKIAPTANERTSEDSFHVTPSSKRFKPDRTNFQKHAHEDVSGSGLNQHVFSWNTHKKKRSSHPGQGSVSDSRGQNSNGRANWN | 1089 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu01g04612 | 1089 | CDD | SF2_C_SNF | 684 | 817 | - | - | |
| Tsu01g04612 | 1089 | MobiDBLite | consensus disorder prediction | 302 | 353 | - | - | |
| Tsu01g04612 | 1089 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 358 | 607 | IPR027417 | - | |
| Tsu01g04612 | 1089 | MobiDBLite | consensus disorder prediction | 1070 | 1089 | - | - | |
| Tsu01g04612 | 1089 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 696 | 857 | IPR001650 | - | |
| Tsu01g04612 | 1089 | MobiDBLite | consensus disorder prediction | 967 | 989 | - | - | |
| Tsu01g04612 | 1089 | PANTHER | ATP-DEPENDENT HELICASE BRM | 11 | 1034 | - | - | |
| Tsu01g04612 | 1089 | SMART | helicmild6 | 722 | 806 | IPR001650 | - | |
| Tsu01g04612 | 1089 | MobiDBLite | consensus disorder prediction | 1008 | 1089 | - | - | |
| Tsu01g04612 | 1089 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 394 | 560 | IPR014001 | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu01g04612 | - | - | gmx:100786280 | 1862.04 |
Showing 1 to 1 of 1 entries